Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3000 ATGAGCCGCGGGGCAGCAACTGCAGCCAAGGGCAAGAAGAAGGGAGTCAGCTTCGTGATCGACTGTTCGAAGCCGGTCGAAGATAAGATCATGGACGTTGCCTCGCTTGAGAAGTTCCTTCAAGAGAGGATTAAAGTCGGTGGCAAGGCCGGTGCCCTCGGTGATTCAGTCACCGTCACTCGTGACAAGAGCAAAATCACCGTTACTTGCGACAGCAATTTCTCTAAAAGGTATTTGAAATATTTGACAAAGAAGTACCTGAAGAAGCATAATGTGAGGGATTGGCTTCGTGTGATTGCGTCCAACAAGGAGCGCAATGTCTATGAATTAAGGTACTTCAACATCGCCGAGAACGAGGGAGAGGAGGAAGACTAG 375 0.4907 MSRGAATAAKGKKKGVSFVIDCSKPVEDKIMDVASLEKFLQERIKVGGKAGALGDSVTVTRDKSKITVTCDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKERNVYELRYFNIAENEGEEED 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3000 124 Gene3D - 5 124 IPR038526 -
Alju03g3000 124 FunFam 60S ribosomal protein L22-2 5 124 - -
Alju03g3000 124 PANTHER 60S RIBOSOMAL PROTEIN L22 2 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
Alju03g3000 124 Pfam Ribosomal L22e protein family 14 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3000 Alju-ChrAlju03 55097461 55098727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3000 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 87.903 6.66e-69 201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g3000 03 55097461 55098727 Alju03g3000 03 55097461 55098727 ECH