Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2966 ATGTGCAGACCATTTTGCAAAGTTCATAAGGCTATTGGCAAAACCGATGCTGCCCCATCTGAATTAGCTCAGGTTGAAGCAAATGGAATCGAGGAAGGCAACGAGAACGATGGTGCTGCTGAAGTTCTGGACGGAGAGGAGCTTCTTGAGCCTTTTATGAAGGAGCATCTCTACACTCTTGTCAGGAAAACTGTAGAGAAGTACTCGGATTTTATTGACAACGTCTGTCAGCTAGCGGACGTCAACCCTGCCCACCGAAAAATCTTCATCCACGGTCTTCGCTGGGACACCACTGCTGAAACCCTTATGAGTGTTTTTTGGAAGTATGGCGATATTGATGATTGCAAGGCTGTCACTGACAGGATCTCAGGGAAATCGAAAGTGAAGGACTAA 393 0.4656 MCRPFCKVHKAIGKTDAAPSELAQVEANGIEEGNENDGAAEVLDGEELLEPFMKEHLYTLVRKTVEKYSDFIDNVCQLADVNPAHRKIFIHGLRWDTTAETLMSVFWKYGDIDDCKAVTDRISGKSKVKD 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2966 130 SUPERFAMILY RNA-binding domain, RBD 78 127 IPR035979 GO:0003676
Alju03g2966 130 PANTHER GEO13361P1-RELATED 79 127 - -
Alju03g2966 130 Gene3D - 83 128 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2966 Alju-ChrAlju03 54910169 54912324 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2966 44 127 C2H2 Transcription Factor Family AT2G19380 41.667 2.24e-16 72.4