LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju03g2965	ATGAAGGGGAAGAGCTGTGGGAGGAGGACCAGCAGCAGAAGACGAAGTGTGAGTAAGGAGGCGACCAAAATGAAGGGAACACTAGCTAGGCACTTGCAGAATCAGCTAGGGCAAGTATCCCTCTTCCCCCTTCACCAACAGTCATCATCTTCCGCCGTCCCTCGATTCCAGAACCTTCTTGAAGCCGAAGCCCGTGACAGCAATCTTCCCTCATCTTCTCATCTCGCTCTGGATCATATGGTTGACAACAATGTGGATGACAAAGATTTCATTCTCAGCCAAGATTTCTTCTGCACTCCAGATTACATAACCCCGGATAATCAGTATATTTTTAACGGCTTGGACTGCAACAAGGAGAATATCCCATGTCCCAAGTCACCGGAAAAACTAAATACTACAAAAAGCAAGAGATGCCGATTGGATGGTATATCAGGGAACCCTCTTAGCCCTACTTTATCTGGTGGTCATCAAGCTGTGGAGCTTGGAACTGAGTCTGCAGCAGATGAAGAAGATATTGAGAAACTGATTTCCACTGGCAAACCAAAGGCTCAAAATTATCTCTCACATTCTGTGGTTGCCTTGCGCTCTAGGGTCATACCCCCTCCTTGCATTAGGAACCCGTATTTGAAAGATGGTTTAGATAAGGACAAAGAAGATCCCTATGGGAACCAAAGATCAAAATATGCAGGTCTGTTCCCTCCAATTACTGGCGGTGATGGGCTTTCACGCTATCGCACTGACTTCCATGAGATTGAGCAAATTGGTATAGGAAACTTTAGTAACGTTTTCAAAGTTTTAAAGAGAATAGACGGTTGCTTGTATGCTGTGAAACACAGCACAAGACAGTTGTGCCAGGAAACAGAAAGGAGAAAAGCTTTGATGGAAATTCAAGCACTGGCAGCCTTAGGATACTATGAAAACATAGTGGGGTACTATTCTTCATGGTTTGAAAATGAGCGGCTGTACATTCAGATGGAGTTATGTGATCATAGCTTATCCATAAGCGAGGCCAATACAATGTTTACAGAAGGCCAAGTGTTAGAAGTACTGCATCAGGTTGCAAAGGCACTGTTGTTTATACATGAAAGAGGAATAGCTCATCTTGATGTTAAACCTGATAATATTTATGTCAAAAATGGTGTTTACAAGCTTGGTGATTTTGGCTGTGCAACTCTCATTGATAAGAGCCTGCCAATTGAAGAGGGTGATGCACGTTATATGCCCCAGGAAATCCTGAATGAGAATTATGATCACCTTGACAAGGTTGATATCTTTTCTCTGGGAGCTTCTATTTTTGAGCTCATTCGAGGATCACCTTTGCCAGAATCAGGATGTAAATCTTTTAATCTGAAAGAAGGCAGGTTGCCACTCCTGCCTGGCCATTCGTTGCAATTTCAGAACTTGCTCAAGGTCATGACGGACCCTGATCCAGTTAAACGACCTAGTGCAAGAGAGTTAGTGGAGAACCCAATCTTTGATTGGGCCCTAAGAAAGTAA	1497	0.4355	MKGKSCGRRTSSRRRSVSKEATKMKGTLARHLQNQLGQVSLFPLHQQSSSSAVPRFQNLLEAEARDSNLPSSSHLALDHMVDNNVDDKDFILSQDFFCTPDYITPDNQYIFNGLDCNKENIPCPKSPEKLNTTKSKRCRLDGISGNPLSPTLSGGHQAVELGTESAADEEDIEKLISTGKPKAQNYLSHSVVALRSRVIPPPCIRNPYLKDGLDKDKEDPYGNQRSKYAGLFPPITGGDGLSRYRTDFHEIEQIGIGNFSNVFKVLKRIDGCLYAVKHSTRQLCQETERRKALMEIQALAALGYYENIVGYYSSWFENERLYIQMELCDHSLSISEANTMFTEGQVLEVLHQVAKALLFIHERGIAHLDVKPDNIYVKNGVYKLGDFGCATLIDKSLPIEEGDARYMPQEILNENYDHLDKVDIFSLGASIFELIRGSPLPESGCKSFNLKEGRLPLLPGHSLQFQNLLKVMTDPDPVKRPSARELVENPIFDWALRK	498

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju03g2965	498	Pfam	Protein kinase domain	248	492	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju03g2965	498	Gene3D	Transferase(Phosphotransferase) domain 1	327	495	-	-
	Alju03g2965	498	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	365	377	IPR008271	GO:0004672\|GO:0006468
	Alju03g2965	498	ProSitePatterns	Protein kinases ATP-binding region signature.	254	277	IPR017441	GO:0005524
	Alju03g2965	498	FunFam	WEE protein kinase	238	326	-	-
	Alju03g2965	498	PANTHER	EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED	102	490	-	-
	Alju03g2965	498	FunFam	Wee1-like protein kinase	327	496	-	-
	Alju03g2965	498	MobiDBLite	consensus disorder prediction	1	22	-	-
	Alju03g2965	498	ProSiteProfiles	Protein kinase domain profile.	248	492	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju03g2965	498	SUPERFAMILY	Protein kinase-like (PK-like)	240	493	IPR011009	-
	Alju03g2965	498	Gene3D	Phosphorylase Kinase; domain 1	239	326	-	-
	Alju03g2965	498	SMART	serkin_6	248	492	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju03g2965	Alju-ChrAlju03	54906618	54910132	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju03g2965	17	493	Core Cell Cycle Gene Families	AT1G02970	59.129	0.0	580

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	WEE	Alju03g2965		Pkinase	2.5e-46	CL0016