Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2954 ATGGAAGCATTACATTTCCGGAGTCCCAGGATGGTTAATCGAACTATTTCTTGCGCATTTCCTTCCAGAAAACCAAAGCAGAATTTTGGGGTTTCAAATGCACAGTTCTTGTTCTTTTTTCTGAACCGATGGCCTCCCAGAGCAGTCTCCTTCAAAATTGAAGCAAATAATTCGAATTTCACTATCGCTTACCTAATAGATTCTTGTGGATTGGCTCCAGAAGCTGCTACTTCAGCTTCGCAGAAGATACAGATACATTCAAGAGAGAGACCGGATTCTGTCCTAACACTGCTCAGAGAACACGGCCTCTCAAAATCCCAGATTTCAAATGTCGTAAGGAAGCGTCCATCGCTCCTTTTAGCTAATCCCAATGATATCCTTTTGCCAAAGCTTGAATTCTTTTACTCCATAGGGATTTCCAGGTCTGACCTCGCAAGAATCCTCGCTACAGACCCAACCGTTCTGAAAAGAAGCTTGGAGAAACAGATAATTCCCTCTTATAATTTCCTCAAAAGTGTGTTGCTTTCTGATGTGAAGGTCGCTTCTGCCTTGAAGCGCACGTCGTGGATTTTTCTGCAAGACCATACGAAGAAGCTCGTACCAAATATTTCCGTTCTGAGAGCAACAGGTGTGCCAGAATCATGCATTGCATTGTTGCTCGCTCATTTTCCCGAGGCATTAATTCAAAAGAACGGTCAGTTCGTAAAGACTGTCGAAGAGGTAAAGGAAATGGGATTCGATCCAACCAAGTCGACATTTGTGTTAGCGATCCATGTAATGGCAGGTAATAAATCGATATATAATCGCTGCTACGAGGTGTACCAGAGGTGGGGGTGGTCGGAGGAAGAGATTCAAATGTCATTCAGAAAGCATCCGAATTGTATGCTTCTATCGGAGGACAAAATAACGAAAGCAATGGACTTTCTGGTGAACAAGATGGGTTGGCCTTCGGGGATGATAGCGAGATGCCCAGTGGTGTTGTTCTTCAGCTTGGAAGCGAGAATCAAGCCGAGGTGTTCTGTTGTTCAGGCTCTGCGATTGAAGGGCTTGATCAAGAAGACTCTGAGCTTGTCTACTGTGTTGTTGCCGGATAAGAAGCGTTTCGAGGAGAAGTTCGTGACAAAGTATGAGCATCAGGTGCCTGAATTGTGGAGTGTCTATGAGATGAAAGTGGATTTTAGGAGCGTCATTTGA 1194 0.443 MEALHFRSPRMVNRTISCAFPSRKPKQNFGVSNAQFLFFFLNRWPPRAVSFKIEANNSNFTIAYLIDSCGLAPEAATSASQKIQIHSRERPDSVLTLLREHGLSKSQISNVVRKRPSLLLANPNDILLPKLEFFYSIGISRSDLARILATDPTVLKRSLEKQIIPSYNFLKSVLLSDVKVASALKRTSWIFLQDHTKKLVPNISVLRATGVPESCIALLLAHFPEALIQKNGQFVKTVEEVKEMGFDPTKSTFVLAIHVMAGNKSIYNRCYEVYQRWGWSEEEIQMSFRKHPNCMLLSEDKITKAMDFLVNKMGWPSGMIARCPVVLFFSLEARIKPRCSVVQALRLKGLIKKTLSLSTVLLPDKKRFEEKFVTKYEHQVPELWSVYEMKVDFRSVI 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2954 397 SMART mt_12 217 247 IPR003690 GO:0003690|GO:0006355
Alju03g2954 397 SMART mt_12 145 176 IPR003690 GO:0003690|GO:0006355
Alju03g2954 397 SMART mt_12 317 351 IPR003690 GO:0003690|GO:0006355
Alju03g2954 397 SMART mt_12 181 212 IPR003690 GO:0003690|GO:0006355
Alju03g2954 397 SMART mt_12 109 140 IPR003690 GO:0003690|GO:0006355
Alju03g2954 397 SMART mt_12 285 316 IPR003690 GO:0003690|GO:0006355
Alju03g2954 397 PANTHER CGI-12 PROTEIN-RELATED 58 376 IPR003690 GO:0003690|GO:0006355
Alju03g2954 397 Gene3D Transcription termination factor 3, mitochondrial 155 387 IPR038538 -
Alju03g2954 397 FunFam Mitochondrial transcription termination factor-like 159 380 - -
Alju03g2954 397 Pfam mTERF 95 248 IPR003690 GO:0003690|GO:0006355
Alju03g2954 397 Pfam mTERF 264 369 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2954 Alju-ChrAlju03 54836411 54837604 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Alju03g2954 mTERF 2.8e-24 No_clan