Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2922 ATGAAAGAGAAGGTAGATTCTCCTGTTGGAGTTCTGGAGGACTATTTTGGAAGTACAGAGTCAGAAACTAGTGGTTCCAATTCCAAAGTTCCCGCGGTGGGTTCTGGCTCTGAAGATGATAAGTCAAAACCTGCCTCTAGATGGCCCGGTTTCCTTCAATTGTTGCGGACCAGATCAAAGAAACATATTGGCCCATTGCATTCTGTGAGCGCCCTCAAGCTCTCAAAGAGATTCAGTCGCGGAACAGAAGAGACTATACTGCCAAATCATCACGTTGATGCAGATTCGTCCCTCCACAGATCATCCTGCAAGATCTTTACCCAGCGTGACATTCAGATGGCAACTAATCATTTCAGCCAGAAGAATTTGATTGGAAAAGGGGGTTATGCTGAAGTTTACAAAGGGTGTTTGCGAAATGGTCAGCTGGTAGCAATTAAACGGCTAACTCGAGGAACCCAAGATGAGATGATAGGGGATTTTTTATCAGAACTGGGCATAATGGCGCATGTGAACCACCCCAATACTTCTAAGTTGGTTGGCTATGGAGTGGAAGGAGGAATGCATCTTGTCCTTGAATTGTCTGAAAAGGGGAGCTTAACTTCCTTGCTTTATGGTTCGAAGGAGAAACTACCATGGTGTGCGAGGCACAAAATTGCGTTGGGAACGGCCAAAGGTATACTTTATCTTCACGAGGGCTGTCATAGGAGGATTATCCACAGAGATGTAAAGGCTGCAAATATCTTGCTCTCCGAGGACTTTGAACCTCAGATTTGTGATTTTGGGCTGGCAAAATGGCTGCCAGAGAATTGGACTCACCACACCGTTTCAAAATTTGAAGGGACTTTTGGCTACCTCGCTCCAGAATACTTGCTTCATGGCATAGTAGACGAGAAAACAGACGTATATGCCTTCGGTGTATTGCTTTTAGAATTGGTCACTGGGCGGCGAGCGCTTGATTATTCACAGCAAAGCCTTGTTTTATGGGCAAGACCATTGCTGAAAAAGAATGAGATTCAGGAGTTGGTTGACCCTTCACTAGGCCAAGACTATGACTGTGGTCAGATTCATGTGGTGCTCTTGGTAGTTTCTGTATGCATCCAACAATCCGCAATTCGTCGGCCTTCCATGAGACAGGTTGTGCAGCTTTTGAACGGCAACCTTAGCTGCTGTAAGCACATGAAGAAAACCCGAGTCTCATTTGTTCGTAAAGTCTTAGAGGAAGAGTTCCTCCATTCTGAGTAG 1242 0.4541 MKEKVDSPVGVLEDYFGSTESETSGSNSKVPAVGSGSEDDKSKPASRWPGFLQLLRTRSKKHIGPLHSVSALKLSKRFSRGTEETILPNHHVDADSSLHRSSCKIFTQRDIQMATNHFSQKNLIGKGGYAEVYKGCLRNGQLVAIKRLTRGTQDEMIGDFLSELGIMAHVNHPNTSKLVGYGVEGGMHLVLELSEKGSLTSLLYGSKEKLPWCARHKIALGTAKGILYLHEGCHRRIIHRDVKAANILLSEDFEPQICDFGLAKWLPENWTHHTVSKFEGTFGYLAPEYLLHGIVDEKTDVYAFGVLLLELVTGRRALDYSQQSLVLWARPLLKKNEIQELVDPSLGQDYDCGQIHVVLLVVSVCIQQSAIRRPSMRQVVQLLNGNLSCCKHMKKTRVSFVRKVLEEEFLHSE 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2922 413 Gene3D Transferase(Phosphotransferase) domain 1 195 406 - -
Alju03g2922 413 Pfam Protein kinase domain 119 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2922 413 ProSitePatterns Protein kinases ATP-binding region signature. 124 146 IPR017441 GO:0005524
Alju03g2922 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Alju03g2922 413 SUPERFAMILY Protein kinase-like (PK-like) 98 383 IPR011009 -
Alju03g2922 413 Gene3D Phosphorylase Kinase; domain 1 89 192 - -
Alju03g2922 413 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 88 192 - -
Alju03g2922 413 PANTHER OS08G0249100 PROTEIN 6 397 IPR046958 -
Alju03g2922 413 SMART serkin_6 118 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2922 413 MobiDBLite consensus disorder prediction 17 33 - -
Alju03g2922 413 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 195 397 - -
Alju03g2922 413 ProSiteProfiles Protein kinase domain profile. 118 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2922 413 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2922 Alju-ChrAlju03 54636283 54638131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2922 91 384 Trihelix Transcription Factor Family AT5G38560 41.830 1.91e-69 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Alju03g2922 Pkinase 5.8e-43 CL0016