Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2911 ATGATTCCCTGGGGTGGAGTCAGTTGCTGCTTGAGTGCGGCTGCTCTTTACCTTCTCGGGAGAAGTAGTGGCAGAGATGCGGAAATTCTTAAATCCGTTACCCGTGTCAACCAGTTAAAAGAATTAGCACAACTGTTAGATGCCGACATATTACCTCTGGTTGTTGCAATTTCTGGAAGAGTTGGCTCTGAAACCCCAGTTAACTGTGAATTCAGTGGTTTAAGGGGTGTAATAGTTGAAGAAACGGCAGAGCAACATTTTCTTAAACACAACGATGCTGGTTCGTGGATACAAGATTCTGCTTTAATGCTATCCATGAGTAAAGAAGTTCCTTGGTATCTGGATGATGGAACTGGTCGTGTTCATGTGGTTGGAGCTCGTGGTGCTACCAGTTTTGTACTGCCTGTTGGAAGTGAAGCGTTTGAAGAGTCAGGTCGATCACTTGTGCGTGGAACATTAGATTATCTCCAAGGTCTCAAGATGCTTGGAGTCAAGAGAATTGAACGAGTACTTCCAATTGGCACATCCTTGACAGTTGTTGGTGAGGCTGCTAAAGATGACATTGGAACCATCCGAATTCAGCGACCCCACAAAGGGCCATTTTATGTCTCTCCAAAAACAATTGATCAGCTCATTGCCAATCTTGGGAAATGGGCAAGGTGGTATAAGTATGCATCTGTGGGCTTGACCCTTTTTGGTGCTTATTTAATAGCCAAGCATGCTATTCAATACATATTGGAAAGAAGACGACGCTGTGAACTGCAAAAGAGGGTTCTTGCAGCAGCTGCTAAGAGGTCAGGACAAGATGGTGAAGGCGAAAAGGCTGAAATTTTACCGGATGGCACAAAAAAGGATCGCATAATGCCAGATTTATGTGTAATATGCCTTGAGCACGAGTACAATGCTGTTTTTGTTCCGTGTGGGCACATGTGCTGCTGTACGACATGTTCTTCCCACTTAACTAGCTGTCCTCTATGCCGGCGGCGGATAGAGCAGGTAGTGAAGACCTATCGTCATTGA 1020 0.45 MIPWGGVSCCLSAAALYLLGRSSGRDAEILKSVTRVNQLKELAQLLDADILPLVVAISGRVGSETPVNCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGTGRVHVVGARGATSFVLPVGSEAFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPIGTSLTVVGEAAKDDIGTIRIQRPHKGPFYVSPKTIDQLIANLGKWARWYKYASVGLTLFGAYLIAKHAIQYILERRRRCELQKRVLAAAAKRSGQDGEGEKAEILPDGTKKDRIMPDLCVICLEHEYNAVFVPCGHMCCCTTCSSHLTSCPLCRRRIEQVVKTYRH 339
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2911 339 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 268 338 IPR013083 -
Alju03g2911 339 ProSiteProfiles Zinc finger RING-type profile. 292 327 IPR001841 -
Alju03g2911 339 SUPERFAMILY RING/U-box 285 333 - -
Alju03g2911 339 CDD RING-HC_LRSAM1 292 335 - -
Alju03g2911 339 Pfam E3 Ubiquitin ligase 85 233 IPR022170 GO:0004842|GO:0006996|GO:0016567
Alju03g2911 339 Pfam Zinc finger, C3HC4 type (RING finger) 290 333 - -
Alju03g2911 339 PANTHER - 1 306 IPR044231 GO:0004842|GO:0016567
Alju03g2911 339 FunFam E3 ubiquitin-protein ligase SP1 280 338 - -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2911 1 272 C3H Transcription Factor Family AT1G63900 78.102 2.92e-156 437
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g2911 03 54546669 54549461 Alju03g2911 03 54546669 54549461 ECH