Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2881 ATGAGGGAGGGGCTTAGATCTCGGAAGCGATTGGAGAAGCCGGAGGCCAACGAGGTTTCTGGAAGTGGCGTATTTCAAAAGAAAGGAAGCATAATAAAACAGGATACTCCTGATTCTAGTGGTGTCGATTCTTCGAATGAGGGAGAGCCTTTGGACTTGGAAGTTGCGAATAAAGAAGTGGAGAAGGTAGCAAAAGAGTGTGAACTGGACTGTGATATGGGGACTGGGACGAATATTGTGTTACTCGAGAATGAGAACAATGGAAGGGTTTTAAATTGTGTGGATAACATTGAGAGGAAGGTGAAGAAGGAAGGGGACTCAAATGATAAATTGCAAACAGTTGGTCGAGTATTGCGCTCACGGTTGAAGAGGGCTGATGGTCAGAAATCTATTAATGAAGATAACGCTGTTGTGGTGGTGAGGAAAAGTAGAGAGTCTGATGGGTCTAAGAAGATACAGGTTAAGGCAGAAGAAGTAGAGACCCATGAATGCGTTAGTAGTGGCTATGAGGAGAAGAAGCTTAAGGAAGGCACTGGCAAACGGAAGTTGAAACGAAAGCGTGGGAGGCCCCCCAAAACAGAGATGACAATGCAGGTTGAGACCCATGAATGCGTTAGTAGTGGTTATGAGGAGAAGAAGATTAAGGAAGGCACTGGCAAACGGGAGTTGAAACGAAAGCGTGGGAGGCCCCCCAAAGCAGAGATGACAATGCAGGTTGGTGGTTTTTCACGGAAGCCAGGGAGGCCACCCAAGGGTGGGCAAAATCATAAACTTATCACAGTGGGATGTAGTAAAGATAGAAAGCTGGGCTTTCATAAAGGTGAAAAAGGTTTAACTATTAGAGAGGGTGCCTGTAGAAGTCCAACTAAACTATGCTCAAATAGACCCTTTGGGAAGAAATTAGAAGTGAATTTTTCTCATATCAAACCTGAGAACAATGTAGGAGCATCACCATTGAGATCAAATTCTTTAAATGTTCCTGTTGCTGTGAAAAGGAAAAAGAATAAAGCAAAGCAGTTGGTGAGGGATCAGATAATGGAACAGCTCATGGCTGCAGGCTGGACAGTTGACTACAGACTTAGGAATGGCAGAGATTACAGTGATGCAGTGTATGTTAGTCTAGACGGAAGGACCCACTGGTCAATTACCTTGGCCTACAATAGGCTGAAGAAACATTATGAAAATGGTGACGGTGAAGGCAAGGTGTATGGGCCAGGTTTTAAATTCACACCTATATCTGAAGAAGAATTTAAAACATTAACTAAGGTGATCAGCAAGCAAAGAAAAGACAAAAAGAAATCAAAAGAGAAAGGGAAAAAGGATGGAGAAAAGGTTACTGGAGCTAATAAAAGGGCAAAAAAGGGGAAGAAGAAGAGGAAACAGTCATTTATTGAGCAGGATCATTCTGATATTGCACCACCTAGCAGAATGTCGATTCTGGTTAAGGATCATAAGCGACAGAAAACTCAAAACAAGAAGCGATGTGTTCTGTTGGTTAGCGATGTCGAGAAAGAGGTAGATTCAGAAGTTGATGGATATGTTCCTTACAATGGAAAACGTACTCTACTTGCCTGGATGATTGATATGGGAATGGTCTTGCAAAATGGGAAGGTTCATTACATGAGCCATGGAAGAGAAGGTGTGGCATTGGAGGGCAGGGTAACAGGAGATGGCATTCACTGTGGCTGCTGTGATGAAATCATAACAATAGCGGAGTTTGAAGCCCATGCAGGAAGCAAACTCTCCGATCCATTTAGAAATATATATGCAGAGGGGGGAACTTCTCTGTTGCAGTGCCTGCTAGATTCGTGGAATAAACAAGATGAATCTGAACGTAAAGGTTTTCATTTCGTTGATGTTGCTGGTGAAGACCCTAATGATGACACTTGTGGTGTCTGTGGAGATGGCGGGGACCTGATATGTTGCGATAGTTGCCCATCAACATTCCATCAAAGCTGCGTGGATATAAAAAAGTTTCCATTTGGGGATTGGCACTGCATTTATTGCTGTTGCAAGTTTTGTGGTTTGGTCAGAAGTGCAAGCAAAAGGGATGATGATGCTGATATTACTGAGTCTGCATTATTTACATGCCACTTATGTGGACAAAAATATCACAGATCCTGTATTGAGGTGGATTGTGCCCAGATTGATGATTCCTTTGATGCATTTTGTGGAAACAGATGTCAAGAGTTACATGAGAGACTCAATATGCTTGTTGGGATCAAACATGAAATCGAAGATGGATTTGCCTGGACTTTAATTCAGCGATCTGATGTTGGCTCAGATGCTTCTAAGATTAAATCTCAGATGGTTGAATGTAATTCCAAGCTAGCAGTTGCTGTATCGATAATGAATGAGTGTTTCAAGCCTTATATTGATCATAGAAGTGGGATTAATATGATCCACAGTATTCTTTATAATTGTGGCTCAAACTTCAACCGCCTGGACTATAGTGGATTTTTTACTGCCATTCTAGAGAGGGGAGATGAAATTATCTGTGCTGCATCTATTAGGATCCATGGGAACCAACTAGCAGAGATGCCATTTATTGGGACCAGGTCTATGTATAGGCGGCAAGGAATGTGCCGTCGTCTCCTAAGTTCCATTGAAGATGCACTCGGCTCTCTGAATGTAGGGTTATTGGTAATACCAGCTGTAGCAGAAGTCAGAGAAACTTGGACTTCAGTTTTTGCGTTTGAGCCACTTGATCCGACAAGCAAACAAATGGTAAAGAACTTAAATCTGTTGGTGTTCCCTCATGTGGACATGTTACAGAAAAAGATACCAAAGCCTACTTCTGCTGAAGAAAATCTGACTCCTGCTGAAGTTTCCAATCCTGAACTTCCCGAGAATACATGTCATGAGTTGGGCCCTTCTGGAACTGAAGTGATCGTTTCTGCTACAGATAACCCATCAAGCCAATGCTCAGGGTTTGAGAAGGCAAGTCAATATCTCACAAAATCAGATGAGATAGTTACACAGAGAAACGGTGGTGAGGATTCTCCGTGCCTCTCGTCAGAAAATATTCCCCACAGATCTGAGATTGTGTCTTGTATGAGGGAATCCAAAGATTCTGAAATCGCATATGATAATTTGAAAAGTGCAACCCCGTTGGAAGATAATGATGGAACTCTGCATCCTGAGTGTCAGGAATTCCAGTTGGCTGAATCTGTTTTTGGTTCACATAAAATTTCCAACAGTTGTGAACCGAGAAATGACCATGACTTTGTTCGGCATCGTTCGGTAGAATCTAAAGAATTGCTTTCTGTGGATTTACCCGTTAATTGCATTAAACCGTACAGTGTGGTCAGTGAGCTAAATGCTGATGAAGTTTGTGCAGCCAAGACATCCAGTCTCCCGACTGACATAAATTCTGGAGATTGCCAATCCGTACAAGCGGCTTCAGGTTCTGCTGAGGATATTTTGAATGGCGTCAATGTTAACGGTGAATTATCTAGTGTAGCTGAGTTCAATTTGCTTCCAGCTGATAAGAAGTTAGTTCTCATTAATAACCGTTGGACGGGCCACTCTTCAGAGCTGCTAGATCCTGGTTTACAGGTTGAGAGAACTGCGCAGTGTAATGGTTCATCTCTGCGTAGCCCAAAAACTACTGGCGTGACTCTTCACTGCGCATCTGCTGGTGGTACTGAGGTGATAGTTCTGTCGAACAAAGCCAGTTGA 3681 0.4276 MREGLRSRKRLEKPEANEVSGSGVFQKKGSIIKQDTPDSSGVDSSNEGEPLDLEVANKEVEKVAKECELDCDMGTGTNIVLLENENNGRVLNCVDNIERKVKKEGDSNDKLQTVGRVLRSRLKRADGQKSINEDNAVVVVRKSRESDGSKKIQVKAEEVETHECVSSGYEEKKLKEGTGKRKLKRKRGRPPKTEMTMQVETHECVSSGYEEKKIKEGTGKRELKRKRGRPPKAEMTMQVGGFSRKPGRPPKGGQNHKLITVGCSKDRKLGFHKGEKGLTIREGACRSPTKLCSNRPFGKKLEVNFSHIKPENNVGASPLRSNSLNVPVAVKRKKNKAKQLVRDQIMEQLMAAGWTVDYRLRNGRDYSDAVYVSLDGRTHWSITLAYNRLKKHYENGDGEGKVYGPGFKFTPISEEEFKTLTKVISKQRKDKKKSKEKGKKDGEKVTGANKRAKKGKKKRKQSFIEQDHSDIAPPSRMSILVKDHKRQKTQNKKRCVLLVSDVEKEVDSEVDGYVPYNGKRTLLAWMIDMGMVLQNGKVHYMSHGREGVALEGRVTGDGIHCGCCDEIITIAEFEAHAGSKLSDPFRNIYAEGGTSLLQCLLDSWNKQDESERKGFHFVDVAGEDPNDDTCGVCGDGGDLICCDSCPSTFHQSCVDIKKFPFGDWHCIYCCCKFCGLVRSASKRDDDADITESALFTCHLCGQKYHRSCIEVDCAQIDDSFDAFCGNRCQELHERLNMLVGIKHEIEDGFAWTLIQRSDVGSDASKIKSQMVECNSKLAVAVSIMNECFKPYIDHRSGINMIHSILYNCGSNFNRLDYSGFFTAILERGDEIICAASIRIHGNQLAEMPFIGTRSMYRRQGMCRRLLSSIEDALGSLNVGLLVIPAVAEVRETWTSVFAFEPLDPTSKQMVKNLNLLVFPHVDMLQKKIPKPTSAEENLTPAEVSNPELPENTCHELGPSGTEVIVSATDNPSSQCSGFEKASQYLTKSDEIVTQRNGGEDSPCLSSENIPHRSEIVSCMRESKDSEIAYDNLKSATPLEDNDGTLHPECQEFQLAESVFGSHKISNSCEPRNDHDFVRHRSVESKELLSVDLPVNCIKPYSVVSELNADEVCAAKTSSLPTDINSGDCQSVQAASGSAEDILNGVNVNGELSSVAEFNLLPADKKLVLINNRWTGHSSELLDPGLQVERTAQCNGSSLRSPKTTGVTLHCASAGGTEVIVLSNKAS 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2881 1226 Pfam Tify domain binding domain 552 601 IPR032308 -
Alju03g2881 1226 SUPERFAMILY FYVE/PHD zinc finger 622 677 IPR011011 -
Alju03g2881 1226 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 818 883 IPR016181 -
Alju03g2881 1226 MobiDBLite consensus disorder prediction 1 51 - -
Alju03g2881 1226 ProSiteProfiles Zinc finger PHD-type profile. 627 672 IPR019787 -
Alju03g2881 1226 MobiDBLite consensus disorder prediction 214 258 - -
Alju03g2881 1226 PRINTS AT-hook-like domain signature 222 233 IPR017956 GO:0003677
Alju03g2881 1226 PRINTS AT-hook-like domain signature 184 194 IPR017956 GO:0003677
Alju03g2881 1226 PRINTS AT-hook-like domain signature 241 251 IPR017956 GO:0003677
Alju03g2881 1226 MobiDBLite consensus disorder prediction 167 195 - -
Alju03g2881 1226 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 619 727 IPR013083 -
Alju03g2881 1226 MobiDBLite consensus disorder prediction 424 469 - -
Alju03g2881 1226 PANTHER PHD FINGER PROTEIN 12 331 1031 IPR042163 GO:0003714|GO:0045892
Alju03g2881 1226 MobiDBLite consensus disorder prediction 1 16 - -
Alju03g2881 1226 SMART PHD_3 671 729 IPR001965 -
Alju03g2881 1226 SMART PHD_3 629 670 IPR001965 -
Alju03g2881 1226 MobiDBLite consensus disorder prediction 23 46 - -
Alju03g2881 1226 MobiDBLite consensus disorder prediction 214 232 - -
Alju03g2881 1226 SMART AT_hook_2 184 196 IPR017956 GO:0003677
Alju03g2881 1226 SMART AT_hook_2 224 236 IPR017956 GO:0003677
Alju03g2881 1226 SMART AT_hook_2 243 255 IPR017956 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2881 Alju-ChrAlju03 54309757 54319080 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2881 182 946 PHD Transcription Factor Family AT5G36670 41.615 0.0 599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1873 01 15267140 15276081 Alju03g2881 03 54309757 54319080 CCT
Alju03g2881 03 54309757 54319080 Alju03g2881 03 54309757 54319080 ECH