Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2880 ATGCGAGGCATAGTTGGAAGAAAGCTGAACTCGTGTTTCTCTAAGATGAAACGACCCTTTCCACCTGAATCTCCTCCCAATCCTACGAGCCTCAACTCTGATTCGTCTCCAGCCGATCACCCCTCCTCCTCTTCCTCGTCTTCATCCTCGTCGTCCATTCTGATAAAGAACTTCAACTCGCTCTATGATCACACCTTTGATCCCTACGAGCCCGAACCTGAACCGGCCGACTTGGCCACCGCCTTTGCCTCCCAACGCTTCTTCTTCTCCTCCCCTGGTCGCTCCAACTCTATCATCCAATCACCATCGTCCCCTGAACACCCCCGGCCCCACAAGCTCTTCACAAACAGCGTGGCCGTGCCGACGTACTCGCCGGACCCTTATATGGACTTCCGGCAATCTATGCGGGAGATGGTGGAGGCGCGTCCCGAGCTGATGGATGTCAAATCAAATTGGGAAATGTTGCAGGAGCTTCTCCTCTGCTATCTTGCTCTGAATCCGAGGACTACCCACAAGTTCATCGTCGGCGCTTTCGCAGATCTTCTTGTCACGCTCACGCTGCCGCCGCAGCAGCAGCAGGAGGAGGCCGCCGCCGCCGCCGAGAGGTGTTAA 612 0.5588 MRGIVGRKLNSCFSKMKRPFPPESPPNPTSLNSDSSPADHPSSSSSSSSSSSILIKNFNSLYDHTFDPYEPEPEPADLATAFASQRFFFSSPGRSNSIIQSPSSPEHPRPHKLFTNSVAVPTYSPDPYMDFRQSMREMVEARPELMDVKSNWEMLQELLLCYLALNPRTTHKFIVGAFADLLVTLTLPPQQQQEEAAAAAERC 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2880 203 Pfam Transcriptional repressor, ovate 124 185 IPR006458 -
Alju03g2880 203 ProSiteProfiles OVATE domain profile. 120 184 IPR006458 -
Alju03g2880 203 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 39 185 IPR038933 GO:0045892
Alju03g2880 203 NCBIfam uncharacterized plant-specific domain TIGR01568 118 186 IPR006458 -
Alju03g2880 203 MobiDBLite consensus disorder prediction 29 51 - -
Alju03g2880 203 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2880 Alju-ChrAlju03 54306771 54307382 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Alju03g2880 Ovate 4.5e-24 No_clan