LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju03g2870	ATGATGCGTGGGTCCCTCTCCTCCCAACACTTGACTATTCAAGAAAGACCCCTCACCTCCTCACTTCACACTCATATATACGTATACATGATAGACCATGATACTTCACAACGCCCTCCTCAGTACTCTCGCTTTACTTGTCCCCTCATTTCTCGCTTCTCCTTCAACTTGAGCTTCCCCAGATCTGCATTAAGGAGAATGAATGTGGAGGGTGGACGCGGCGGTGTGGCCATACCGCCGGCGAAGCCATTTCTCAAGTGGCTCAAGGGCTCTCTCAAGGAGACTTTCTTTCCTGATGACCCCTTCAGGCAGTTCCAGAAGCAGCCTCCTTCAACCAGGTTCCTCCTTGCCCTTCAATACATCTTTCCCATCTTCCACTGGGCTCCTCGCTACTCTCTCCACTTCCTCAAATCTGACGTCATTGCCGGCATTACCATCGCCAGCCTGGCTATTCCTCAGGGCATCAGCTACGCCAAGCTCGCCAACCTCCCTACCATTCTTGGCCTCTATTCCAGCTTCATACCGCCACTGATTTATGCGATGATGGGAAGCTCCAGGGATTTGGCGGTAGGCACTGTTGCCGTTGGATCACTTCTCATGGCTTCCATGTTGGGCAGTGTCGTTGATCACAACCACAACCCCAAGCTTTTTCTTCACCTCGCCTTCACTGCTACTTTCTTCGCCGGCATTTTCCAGGCTGCTCTCGGCCTCTTTAGCTTTTGTCCACAAATTATTGCCCACATTCCAATGAATGTCCTTTTTATAACTCGTTTCATTAAATGCACAGTGGAGGTGGGAAAGCGCCGTGTTAGGATGCTGTTTCATTTTCTTCCTCCTCATCACCAGATTCTTCAGCAAAAAGCAACCAAAATTCTTTTGGGTGTCAGCAATTGCGCCGTTGACTTCCGTTATCTTTGGAAGCATTCTGGTTTACGTCACTCATGCGGAGAAACACGGCGTCCAAGTGGTGAGCCCCGAACTTGTCTCTCTTTTCCTAATCATAACATAGGAGACCTAAAGAAGGGGCTAAATCCCGGTTCCCTGACAAAGCTGGTATTTGTGGCGCCTTATTTGAGCACTGCTATTAAGACTGGCCTTATCACTGGCATCATAGCTCTTGCGGAAGGAATAGCAGTAGGAAGAAGCTTTGCAATGTACAAGAATTACCATATCGATGGCAACAAAGAAATGATAGCTATTGGGACCATGAACATCGTTGGTTCTTTCACCTCTTGCTACCTCACCACAGGGCCATTTTCACGTTCAGCTGTGAACTATAATGCTGGATGCAAGACTGCAGCATCAAATATAGTAATGGCAATAGTAGTTATGTTGACGCTGTTATTTCTGACACCCTTGTTCCATTACACTCCCCTGGTGGTTCTATCAGCTATCATTGTCTCAGCAATGCTTGGACTTATAGACTACCAAGCAGCCATCCATCTCTATAAGATTGACAAATGTGATTTTCTAGTGTGCATTAGTGCCTACATTGGCGTCGTTTTTTGCAGCGTTGAAATTGGCCTTGTCATAGCGGTTGCAATATCTGTACTTAGGTTACTTCTCTTTATTGCAAGGCCAAGGACATCTGTTTTAGGCAACATTCCAAATTCTGAGGTATATAGAAATGTTGAACAGTATCCAAATGCAATCCACGTTCCTGGGATTCTAATTCTTGAGATTGATGCACCCATATACTTTGCTAATGCAAGCTATTTGAGAGAGAGGTGCCTTTCTTGTGCTGCCTTTAATTGGCCTTTAGATTTTTCACCTCAAAGAAATTCTTGCCTTCTAAACACCTGCTTAGAAAAAAATGCTATCACTGTTAATAGGATCACAAGGTGGATTGATGAAGAGGAAGACAGGATTAAAGGTACAGAGGAGACAAGCTTGCGGTATGTTATAATGGATATGACTGCCGTTGGGAACATCGACACTAGTGGAATAAGCATGTTTGAAGAGATCAAGAAGATTGTAGATAGAAGAGGACTACAACTTGTTCTGGTCAATCCTGGAGGCGAGGTGATGAAGAAACTGAACAAAGCCAAGTTCATAGAGGAAATAGGGCAGAAATGGATACATCTAACAGTAGAAGAGGCAGTTGAAGCATGCAGCCACATGCTTCACGCATGCAAAACCAACCCCACCAAGAATGAATCAGAGGGCTGGAACAATGTTGGGGGCTTTGCCGTTCACAGTTCTGCTGCGGTTCACCTTCGGGCGTTGAGTGATTCTTCTTCGAATCCCAACTTGCAAGGAGTCCAAACTTACCCTCGAAAACGGCCAATCTTGCCACCACTACGATCTTTCCTTATGGAGATTGAAGCGGATACAGGAAGTAGCTCCCTAATTCTGCTGAAGCAAGGAGCTGAAGCCAGGGTTTTTGAGTCTGATTTTGTGGGAAGGAGGTCTGTTGTTAAAGAGCGCTTCTCAAAGAAGTACAGGCATCCAATTTTGGATTCTAAACTTACTCTAAAGCGCTTAAATGCGCAGGAGGCCAGGTGCATGACCAAAGCAAGACGGCTTGGGGTTTGTACTCCAGTGCTGTATGCTGTGGATCCTGTGTCACACACATTAACGTTTGAATTTGTTGAGGGACCTTCGGTGAAAGATGTATTTCTTGAATTTGGGTTACATGGTGTCAACAAAAAGCAGTTGGATGATATTGCATCCCAAATTGGTGATGCAATTGGAAAAACACATGATGGCGGCCTAATTCATGGTGATTTGACCACCTCTAATATGCTTCTGAGGAATGGCACCAATCAGTTGGTCCTCATTGACTTTGGTTTGAGCTTCACTTCAACTCTACCAGAAGATAAAGCTGTTGATCTGTATGTTTTGGAAAGAGCCCTTCTTTCAATGCACTCTTCATGTGGGAATGTGATGGACTGGATACTTGCAGCGTATCGCAAATCGTCCAAGCAATGGTCATCCACCTTAAACAAGCTGGCGCATGTGCGACAAAGAGGACGAAAGAGGACCATGGTCGGATGA	2997	0.4558	MMRGSLSSQHLTIQERPLTSSLHTHIYVYMIDHDTSQRPPQYSRFTCPLISRFSFNLSFPRSALRRMNVEGGRGGVAIPPAKPFLKWLKGSLKETFFPDDPFRQFQKQPPSTRFLLALQYIFPIFHWAPRYSLHFLKSDVIAGITIASLAIPQGISYAKLANLPTILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMASMLGSVVDHNHNPKLFLHLAFTATFFAGIFQAALGLFSFCPQIIAHIPMNVLFITRFIKCTVEVGKRRVRMLFHFLPPHHQILQQKATKILLGVSNCAVDFRYLWKHSGLRHSCGETRRPSGEPRTCLSFPNHNIGDLKKGLNPGSLTKLVFVAPYLSTAIKTGLITGIIALAEGIAVGRSFAMYKNYHIDGNKEMIAIGTMNIVGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMAIVVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLIDYQAAIHLYKIDKCDFLVCISAYIGVVFCSVEIGLVIAVAISVLRLLLFIARPRTSVLGNIPNSEVYRNVEQYPNAIHVPGILILEIDAPIYFANASYLRERCLSCAAFNWPLDFSPQRNSCLLNTCLEKNAITVNRITRWIDEEEDRIKGTEETSLRYVIMDMTAVGNIDTSGISMFEEIKKIVDRRGLQLVLVNPGGEVMKKLNKAKFIEEIGQKWIHLTVEEAVEACSHMLHACKTNPTKNESEGWNNVGGFAVHSSAAVHLRALSDSSSNPNLQGVQTYPRKRPILPPLRSFLMEIEADTGSSSLILLKQGAEARVFESDFVGRRSVVKERFSKKYRHPILDSKLTLKRLNAQEARCMTKARRLGVCTPVLYAVDPVSHTLTFEFVEGPSVKDVFLEFGLHGVNKKQLDDIASQIGDAIGKTHDGGLIHGDLTTSNMLLRNGTNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSMHSSCGNVMDWILAAYRKSSKQWSSTLNKLAHVRQRGRKRTMVG	998

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju03g2870	998	FunFam	Protein kinase superfamily protein	879	995	-	-
	Alju03g2870	998	NCBIfam	KEOPS complex kinase/ATPase Bud32	789	992	IPR022495	GO:0004674
	Alju03g2870	998	ProSitePatterns	Tyrosine protein kinases specific active-site signature.	905	917	IPR008266	GO:0004672\|GO:0006468
	Alju03g2870	998	Pfam	STAS domain	547	584	IPR002645	-
	Alju03g2870	998	Pfam	STAS domain	610	700	IPR002645	-
	Alju03g2870	998	Gene3D	Transferase(Phosphotransferase) domain 1	878	995	-	-
	Alju03g2870	998	Pfam	Protein kinase domain	830	933	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju03g2870	998	Gene3D	STAS domain	526	707	IPR036513	-
	Alju03g2870	998	FunFam	TP53-regulating kinase isoform X1	791	864	-	-
	Alju03g2870	998	Gene3D	Phosphorylase Kinase; domain 1	791	864	-	-
	Alju03g2870	998	SUPERFAMILY	Protein kinase-like (PK-like)	786	946	IPR011009	-
	Alju03g2870	998	ProSiteProfiles	STAS domain profile.	546	704	IPR002645	-
	Alju03g2870	998	SUPERFAMILY	SpoIIaa-like	549	704	IPR036513	-
	Alju03g2870	998	ProSiteProfiles	Protein kinase domain profile.	780	998	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju03g2870	998	SMART	serkin_6	780	997	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju03g2870	998	PANTHER	SULFATE TRANSPORTER	336	706	IPR001902	GO:0016020\|GO:0055085
	Alju03g2870	998	Pfam	Sulfate permease family	136	241	IPR011547	GO:0016020
	Alju03g2870	998	Pfam	Sulfate permease family	335	495	IPR011547	GO:0016020
	Alju03g2870	998	CDD	STAS_SulP_like_sulfate_transporter	547	697	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju03g2870	Alju-ChrAlju03	54247821	54256398	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju03g2870	76	710	Inorganic Solute Cotransporters	AT3G15990	46.809	0.0	557

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-4	Alju03g2870		Sulfate_transp	5.9e-50	CL0062

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Alju03g2870	03	54247821	54256398	Alju03g2870	03	54247821	54256398	ECH