Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2847 ATGGACGCCCACTCGTCTCACGCGGCCGGAAACATTCGCTCCCGTAGCTCCCAGTCCCCTTCTCCCTCTCACTCTGCTTCTGCCTCTGCTACCTCCACCATCCACAAGCGCAAGATGGCGTCTGACGATCACGCTCCTCCCTTTCCCCCTTCTTCCTTCTCTGCCGACACCCGTGACGGTGCTTTAACCTCCAATGATGACCTCGAGAGCATCTCTGCCCGCGGCGCTGATTCCGATTCCGACGATGAGTCGGAGGATGCCGTTGTTGACGAGGAGGAGGAGGATTACGACAATGACTCCTCCATGCGCACCTTCACTACTGCTAGGCTTGAAAACCCCCCCTCAGCTCCGCGGAATACCAAGCTCCAAAAGGATAATATGACGGTCAAGATAGAGAATTCGGATGGTGCTAAAGACGCTGCTACCGCGGGCACTGCTACGGTGGGAACCATTCCCACCTCGACCTCAGTTTCGGGCATTATGGTTAAGGAGGACGCAACAAAGATTTTTACTGATAATTTGCAGACGAGTGGGGCATACTGTGCTAGGGAAGAGAATCTAAAGAGAGAGGAAGAAGCAGGGAAGCTGAAATTCATATGCCTTTCAAATGATGGGGCTGATGAGAATATGGTTTGGCTGATAGGATTGAAGAATACTTTTGCTAGACAACTTCCCAATATGCCCAAGGAATACATTGTCCGACTCGTTATGGATAGGAACCATAAGTCTGTGATGGTTATAAGACGTAATCAAGTTATAGGAGGAATTACATATCGCCCGTATGTAAGCCAAAAGTTCGGTGAGATAGCCTTTTGTGCGATAACAGCTGATGAGCAAGTAAGAGGTTATGGCACCAGACTGATGAATCACTTGAAGCAGTATGCTCGTGATGAGGATGGATTGACACACTTTCTCACGTATGCTGATAATAATGCTGTTGGCTATTTTATCAAGCAGGGCTTCACAAAAGAGATTCACTTGGAGAAAGATCGATGGCAAGGGTATATAAAGGATTATGATGGAGGAATTCTCATGGAATGCAAGATTGATCCAAAGCTCCCATACACTGATTTATCGACTATGATTCGTCGTCAGAGGCAGGCTATTGATGAAAAGATAAGAGAGCTGTCAAACTGTCACATTGTTTATCCTGGATTTGATTTTCAGAAGAAAGAAGCTGGTATTCCTAAAAAATCAATCAAAGTTGAGGACATCCCTGGTTTGAGAGAGGCTGGATGGACTCCTGATCAGTGGGGTCATTCCCGATTCAGAAGTTTAAGTGTTTCTACAGACAGCGCTGTGAATCAAAAGCATTTGACTGGATTTATGCGATCACTTCTAAAGTCAATGCACGACCATGCTGATGCCTGGCCATTCAGGGAACCAGTTGATGCCCGGGATGTTCCTGATTATTATGACATCATCAAAGATCCAATGGATCTGAAGACAATGTCGAAGAGGGTGGAGTCTGAGCAATATTATGTTACATTTGAGATGTTCGTTGCAGATGTCAGAAGAATGTTCGGCAATGCACGAACCTATAACTCTCCAGACACTATCTATTACAAATGCGCTACCAGGCTGGAAGCCCATTTTCAAAGCAAGGTACAGTCGGGTCTACAGTCTGGCGCCAAAATTCAGTAG 1644 0.4647 MDAHSSHAAGNIRSRSSQSPSPSHSASASATSTIHKRKMASDDHAPPFPPSSFSADTRDGALTSNDDLESISARGADSDSDDESEDAVVDEEEEDYDNDSSMRTFTTARLENPPSAPRNTKLQKDNMTVKIENSDGAKDAATAGTATVGTIPTSTSVSGIMVKEDATKIFTDNLQTSGAYCAREENLKREEEAGKLKFICLSNDGADENMVWLIGLKNTFARQLPNMPKEYIVRLVMDRNHKSVMVIRRNQVIGGITYRPYVSQKFGEIAFCAITADEQVRGYGTRLMNHLKQYARDEDGLTHFLTYADNNAVGYFIKQGFTKEIHLEKDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVYPGFDFQKKEAGIPKKSIKVEDIPGLREAGWTPDQWGHSRFRSLSVSTDSAVNQKHLTGFMRSLLKSMHDHADAWPFREPVDARDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVADVRRMFGNARTYNSPDTIYYKCATRLEAHFQSKVQSGLQSGAKIQ 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2847 547 PANTHER GH11602P 29 543 IPR037800 GO:0004402
Alju03g2847 547 Pfam Bromodomain 444 526 IPR001487 GO:0005515
Alju03g2847 547 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 218 351 IPR016181 -
Alju03g2847 547 MobiDBLite consensus disorder prediction 9 35 - -
Alju03g2847 547 MobiDBLite consensus disorder prediction 56 71 - -
Alju03g2847 547 Pfam Acetyltransferase (GNAT) family 239 321 IPR000182 GO:0016747
Alju03g2847 547 SUPERFAMILY Bromodomain 422 537 IPR036427 GO:0005515
Alju03g2847 547 Gene3D - 430 545 IPR036427 GO:0005515
Alju03g2847 547 CDD NAT_SF 243 297 - -
Alju03g2847 547 ProSitePatterns Bromodomain signature. 456 514 IPR018359 -
Alju03g2847 547 MobiDBLite consensus disorder prediction 1 102 - -
Alju03g2847 547 CDD Bromo_gcn5_like 442 537 - -
Alju03g2847 547 Gene3D - 192 356 - -
Alju03g2847 547 ProSiteProfiles Bromodomain profile. 451 522 IPR001487 GO:0005515
Alju03g2847 547 MobiDBLite consensus disorder prediction 79 98 - -
Alju03g2847 547 PRINTS Bromodomain signature 454 467 IPR001487 GO:0005515
Alju03g2847 547 PRINTS Bromodomain signature 503 522 IPR001487 GO:0005515
Alju03g2847 547 PRINTS Bromodomain signature 468 484 IPR001487 GO:0005515
Alju03g2847 547 FunFam Histone acetyltransferase KAT2A 193 357 - -
Alju03g2847 547 SMART bromo_6 432 541 IPR001487 GO:0005515
Alju03g2847 547 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 203 350 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2847 Alju-ChrAlju03 54072330 54078567 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Alju03g2847 Bromodomain 6.4e-22 No_clan