Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2846 ATGGCCAATAACCCATCCGAGGCTCCCACCGACGACTTCTTTGAACAAATCCTCGGCCTTCCAACTTTCGCTTCCATTGACTCCGGCTTGGCCGGTTCGGCTTCTCCGGCTCACAAGATGCTTCAGCTCAACTCCAGCGATGCCACCGGCCACCCCTCCGCCGTTGGTGCTGCGGGCGGTGCTGGTTTTCATGGCCCAGTTTACCAGTTAGGCCTCAGTTTGGACCAAGGAAAAGGAGCAAGTTATTTTAAACCCGAGGAGGCTTCGGGGAGTGGGAAGCGCTTTCACGATGACGTCGTTGATGGTCGAATTAAGAATGTTTTTCATGGGCAGACTATGCCATCTACCCTTCCTGCTGCTCCGCAGCCCCCAACAATGCGACCGAGGGTGCGGGCTCGAAGAGGACAGGCCACAGATCCACACAGCATAGCTGAACGGTTGCGCAGAGAAAGAATAGCAGAAAGAATTAGGGCCCTGCAGGAATTGGTTCCTAGTGTTAATAAGACAGATAGAGCTGCCATGTTAGATGAAATTGTGGATTATGTCAAGTTCTTAAGACTTCAAGTGAAGGTTCTGAGTATGAGTAGATTGGGTGGAGCCGGTGCAGTGGCACCACTCGTGACTGACATCCCATTATCATCGGTTGAGGAAGATGGAAGTGAAGGTGGAAGAAATCAAGCAATATGGGAGAAGTGGTCGAATGATGGCACAGAAAGACAAGTAGCTAAGCTTATGGAGGAAAATGTTGGAGCTGCCATGCAATTCCTTCAATCAAAGGCTCTCTGCATAATGCCGATCTCGCTCGCCTCTGCGATATACCACTCACAGCCACCAGACACCTCAAGCATAGTAAAGTCAGAGACTAATCCTCCTCCATAG 879 0.5085 MANNPSEAPTDDFFEQILGLPTFASIDSGLAGSASPAHKMLQLNSSDATGHPSAVGAAGGAGFHGPVYQLGLSLDQGKGASYFKPEEASGSGKRFHDDVVDGRIKNVFHGQTMPSTLPAAPQPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEDGSEGGRNQAIWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYHSQPPDTSSIVKSETNPPP 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2846 292 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 51 271 - -
Alju03g2846 292 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 136 185 IPR011598 GO:0046983
Alju03g2846 292 SMART finulus 142 191 IPR011598 GO:0046983
Alju03g2846 292 Pfam Helix-loop-helix DNA-binding domain 141 185 IPR011598 GO:0046983
Alju03g2846 292 MobiDBLite consensus disorder prediction 111 140 - -
Alju03g2846 292 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 134 195 IPR036638 GO:0046983
Alju03g2846 292 Gene3D - 131 193 IPR036638 GO:0046983
Alju03g2846 292 FunFam Basic helix-loop-helix transcription factor 131 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2846 Alju-ChrAlju03 54062601 54066140 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2846 63 291 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 79.574 1.34e-119 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju03g2846 HLH 1.1e-07 No_clan