Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2843 ATGGAGAGTCCAACAATATCAATGGGTGAGCTGAACCTAAAGGACACAGAGCTAAGGCTTGGATTGCCAGGCAGCGATGAGCCAGAGAAAAGTTGCAATGTTGGAAGCAAAAGGAAATGTTCACCTGAGGAGGAATCAACAGGCAATAGTAGTAAAGCTAAAAGTGATCATAACCAGTCAGACAATAATGGCCCACCAGCAAAGGCACAAGTAGTGGGGTGGCCACCAGTGAGAAGTTTCAGGAGGAACAATGTACAACAGAAGAAGGAGGAAGAGGGTGGGAGGTACGTGAAAGTGGGCATGGCTGGTGCAGCTTACTTGAGGAAGATAGATTTGAAGGTTTATAAGAGCTACCCACAAGTCCTAAAGGCCTTGGAAAACATGTTCAAGTGCACTTTCGGAGAATATTCAGAGAGGGAGGGATACAATGGATCTGAGTATGTTCCCACGTATGAAGACAAAGAGGGAGACTGGATGCTTGTTGGAGATGTTCCATGGGACATGTTCACATGCTCCTGCAAGAGGCTCAGAATCATCAAAGCATCTGAAGCTAAGGGTTTGGGTTGTCTATGA 573 0.4607 MESPTISMGELNLKDTELRLGLPGSDEPEKSCNVGSKRKCSPEEESTGNSSKAKSDHNQSDNNGPPAKAQVVGWPPVRSFRRNNVQQKKEEEGGRYVKVGMAGAAYLRKIDLKVYKSYPQVLKALENMFKCTFGEYSEREGYNGSEYVPTYEDKEGDWMLVGDVPWDMFTCSCKRLRIIKASEAKGLGCL 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2843 190 SUPERFAMILY CAD & PB1 domains 91 179 - -
Alju03g2843 190 Gene3D - 88 190 - -
Alju03g2843 190 MobiDBLite consensus disorder prediction 1 91 - -
Alju03g2843 190 MobiDBLite consensus disorder prediction 31 51 - -
Alju03g2843 190 ProSiteProfiles PB1 domain profile. 94 186 IPR000270 GO:0005515
Alju03g2843 190 MobiDBLite consensus disorder prediction 52 66 - -
Alju03g2843 190 Pfam AUX/IAA family 41 188 IPR033389 -
Alju03g2843 190 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 10 185 IPR003311 GO:0005634|GO:0006355
Alju03g2843 190 FunFam Auxin-responsive protein 89 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2843 Alju-ChrAlju03 54053441 54054134 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2843 86 187 B3 DNA Binding Superfamily AT2G46530 36.275 1.10e-12 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Alju03g2843 AUX_IAA 5.5e-53 CL0072