Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2842 ATGGAAGTTATTGGGATGAAGAAGGAGAAGATGGGATTCGAGGAAACGGAGCTGAGGCTTGGACTGCCTGGTGCCGAAGCTGCGAGGAAGAGAGGTTTTTGTGAGACTGAGACGACTGAGGACAATAATAATGGCACTGTGGATTTGATGCTCAATCTCTCTTCTTGCAAAGAAGCTGATCATTCCACTGACAAACCCAAGGAGAAGACTCTTCTTCCTGCCGATCCCACCAAGCCTCCTGCCAAGGCACAAGTGGTGGGATGGCCACCTGTGAGATCGTTCCGGAAGAACATGTTAGCACAGAAGAAGAACGGAGAAGAGAGTGACCAGAAAAGCAGCCCTAATGGAAGCTTCGTGAAAGTGAGCATGGACGGAGCTCCATATCTTCGCAAGGTGGACCTCAAGATATACAAGAGCTATCAAGACCTCTCTGATGCCTTGGGCAACATGTTCAGCTCCTTCACCATAGGGAATTGTGGATCCCAAGGACTGAAGGATTTCATGAATGAGAGTAAGCTGATGGATCTGTTGAACAGCTCCGACTATGTCCCGACCTATGAGGACAAGGATGGCGACTGGATGCTTGTCGGTGATGTCCCTTGGGAGATGTTCGTTGAATCCTGCAAGCGCTTGCGTATTATGAAAGGAAAGGAGGCCATTGGGCTTGCACCAAGAGCCATGGAGAAGGTCAAGAACCGAAGCTAG 705 0.4965 MEVIGMKKEKMGFEETELRLGLPGAEAARKRGFCETETTEDNNNGTVDLMLNLSSCKEADHSTDKPKEKTLLPADPTKPPAKAQVVGWPPVRSFRKNMLAQKKNGEESDQKSSPNGSFVKVSMDGAPYLRKVDLKIYKSYQDLSDALGNMFSSFTIGNCGSQGLKDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAMEKVKNRS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2842 234 SUPERFAMILY CAD & PB1 domains 111 215 - -
Alju03g2842 234 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 221 IPR003311 GO:0005634|GO:0006355
Alju03g2842 234 MobiDBLite consensus disorder prediction 58 85 - -
Alju03g2842 234 Pfam AUX/IAA family 15 225 IPR033389 -
Alju03g2842 234 Gene3D - 110 228 - -
Alju03g2842 234 FunFam Auxin-responsive protein 111 226 - -
Alju03g2842 234 MobiDBLite consensus disorder prediction 58 72 - -
Alju03g2842 234 ProSiteProfiles PB1 domain profile. 116 216 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2842 Alju-ChrAlju03 54043495 54045627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2842 106 224 B3 DNA Binding Superfamily AT4G23980 31.092 4.43e-08 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Alju03g2842 AUX_IAA 7.5e-83 CL0072