Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2834 ATGGATGAGGTTGAAGAAGCTAACAGAGCAGCTGTTGAAAGCTGCCATAGAGTTCTAAGTCTGCTGTCTGAGCGCCAGGATCAGATTCCTTATGGCAAGTTAATGGTGGAAACTGGCGAGGCTGTGTCCAGGTTCAAGAAAGTTGTTTCATTGCTCCATAATGGTTTGGGTCATGCTAGAGTCAGGAAGCACAGAAAACTTGAAATCCCTTTTCCTCAAAGTATTCTCTTGGACAATCCAAATTTCAAATCAAACCATTGTCCCAAAAATCTTCTGTCTCCGCAACCCATTTCTTCGGACTATTCAATTCAGGAGTTGGGCGCAAATATTGGAAACTCACTGTCTCTGGGAAAACCATCTTTGGAATTGAGTTCAAATGGCAAAAATCCCCTACACCTTACCCCTCCAGCGTCATCGCCGCGTTATCACTTACTTCAGCAGCAGCAAAGAATATTGCTACAGCAGCAACAAATGAAACACCAAGCAGAAATGATGTTTCTAAAGAGCAATAGTGGAATCAGTCTGAATTTTGATAGCTCTAGCTGCACACCCACTATGTCATCTACTAGGTCTTTCATTTCTTCTTTAAGCATAGATGGAAGCGTAGCTAACTTGGATGGGACTGGGAGTGCCTTCCATTTAATTGGAGCCCCACACTCCTCAGATCAGAATTCACAACACCACAAGAGAAAGTGTTCTGGCAGAGACGAAGGAAGTGTGAAATGTTGGAGCAGTACTAGATGCCATTGCTCAAAGAAGAGAAAGCATAGAGTGAAGAGGTCAATCAAGGTGCCTGCCATTAGCAACAAGCTTGCTGATATACCCCCTGATGATTATTCATGGAGAAAATATGGGCAGAAGCCAATCAAAGGCTCTCCTCATCCGAGAGGATACTACAAGTGCAGCAGCATGAGAGGGTGCCCTGCTAGGAAGCATGTAGAGAGGTGCTTGGAAGACCCTTCAATGCTAATTGTTACATATGAAGGTGAGCATAACCACCCTAAAATATCAGCACAATCTGCAAATGCATGA 1032 0.439 MDEVEEANRAAVESCHRVLSLLSERQDQIPYGKLMVETGEAVSRFKKVVSLLHNGLGHARVRKHRKLEIPFPQSILLDNPNFKSNHCPKNLLSPQPISSDYSIQELGANIGNSLSLGKPSLELSSNGKNPLHLTPPASSPRYHLLQQQQRILLQQQQMKHQAEMMFLKSNSGISLNFDSSSCTPTMSSTRSFISSLSIDGSVANLDGTGSAFHLIGAPHSSDQNSQHHKRKCSGRDEGSVKCWSSTRCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEDPSMLIVTYEGEHNHPKISAQSANA 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2834 343 SMART WRKY_cls 275 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju03g2834 343 MobiDBLite consensus disorder prediction 218 239 - -
Alju03g2834 343 Pfam Plant zinc cluster domain 229 273 IPR018872 -
Alju03g2834 343 Gene3D WRKY domain 260 335 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju03g2834 343 FunFam WRKY transcription factor 65 259 336 - -
Alju03g2834 343 SUPERFAMILY WRKY DNA-binding domain 273 335 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju03g2834 343 ProSiteProfiles WRKY domain profile. 270 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju03g2834 343 MobiDBLite consensus disorder prediction 223 237 - -
Alju03g2834 343 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 3 340 IPR044810 GO:0003700
Alju03g2834 343 Pfam WRKY DNA -binding domain 277 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2834 Alju-ChrAlju03 53963674 53965254 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2834 1 340 WRKY Transcription Factor Family AT2G30590 56.316 3.80e-128 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju03g2834 WRKY 1.5e-26 CL0274