Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2819 ATGGAATTCAGAAACCCAGAAGATTCCAGAAGCTCCAGCAACGAAACCGATGATACGACAGGGATTGGAAGATCCTACGAGTGCGTGTTTTGCAAGAGAGGCTTCACTACAGCACAAGCTTTGGGAGGACATATGAATATACACAGGAAGGATAGAGCCAAAACCAAGCCCAGTAATAATATTGGTCCTTCATCTTCAACCAAACTTGTGGATCTCGGTTTCTATTCTGCAAGTACTACTACTAGTCCTGAAAATTACTATTTAACACCTACTCCTCCTGATGAGGTAGATAGTAATTACCCTCAATTTTATCATGCCAGTAGTACAATCAGATCTTCTTCTTCGCATGTGCCAGATTGGAGGACCAGAAGCTTGAGCTTGTATACCAATCCTTTCTGCGTCGTACGCGACAAGATACAAGACGATATGTCAGAGGATGGCCTGGATTTGGAGCTTCGACTGGGTTATCACCCATAG 477 0.4361 MEFRNPEDSRSSSNETDDTTGIGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKTKPSNNIGPSSSTKLVDLGFYSASTTTSPENYYLTPTPPDEVDSNYPQFYHASSTIRSSSSHVPDWRTRSLSLYTNPFCVVRDKIQDDMSEDGLDLELRLGYHP 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2819 158 ProSiteProfiles Zinc finger C2H2 type domain profile. 26 53 IPR013087 -
Alju03g2819 158 Gene3D Classic Zinc Finger 8 73 - -
Alju03g2819 158 SUPERFAMILY beta-beta-alpha zinc fingers 24 53 IPR036236 -
Alju03g2819 158 ProSitePatterns Zinc finger C2H2 type domain signature. 28 48 IPR013087 -
Alju03g2819 158 Pfam C2H2-type zinc finger 26 50 - -
Alju03g2819 158 PANTHER OS07G0101800 PROTEIN 8 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2819 Alju-ChrAlju03 53826905 53827381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2819 9 57 C2H2 Transcription Factor Family AT3G09290 59.184 2.67e-15 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju03g2819 zf-C2H2_6 1.3e-05 CL0361