Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2816 ATGACTGGGTCTGGATCTCCGTGTGGAGCCTGCAAATTCTTGAGAAGGAAATGTGTGAGAGGGTGTGTGTTTGCGCCATACTTTTGCCATGAGCAAGGAGCTACTCATTTTGCAGCGATTCATAAGGTGTTTGGTGCAAGCAATGTTTCCAAGCTCCTTGTTCACCTCCCTGTGAGTGACCGGAGTGAAGCCGCCGTCACCATCTCCTACGAAGCTCAGGCTAGGCTTCAGGATCCTATCTATGGCTGTGTTTCTCATATCTTCGCCCTCCAGCAGCAGGTGGTCAATTTACAAGCACAGCTAGCTTTTATGAGGGAACAGGCAGCTCAAAGCTTTCATACGGAAAACCCTAATGAAAAGTACTGTGGAAAACCTACTACTGCTACTAATTTCCCTCACGATCTTCATGGTTGGTTCCAGAGCCAAAATTCCGACACGGCAGGGCCTCATCATGAGTTTATTCCAAACGTGTCTAATAATTATGGGAGTAGCAGCAGCAGCAATCCTTTCATGAATCTAAACCCTATGGGGAATAATAATGAAAAAAGCATGTCATTTTCTAGCTTTGATGAGACTGCTTCTAATAACTCCATGTCCTATGACGTCGTGCAAGCAAACAGCAAGCACTGGGGCTTTCATGAAGTGGACGACCTTCAGTCGGTGGCTTTCGGTTTCAGCCGATCGGCTTCATGA 693 0.4675 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLVHLPVSDRSEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLAFMREQAAQSFHTENPNEKYCGKPTTATNFPHDLHGWFQSQNSDTAGPHHEFIPNVSNNYGSSSSSNPFMNLNPMGNNNEKSMSFSSFDETASNNSMSYDVVQANSKHWGFHEVDDLQSVAFGFSRSAS 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2816 230 Coils Coil 87 107 - -
Alju03g2816 230 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Alju03g2816 230 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Alju03g2816 230 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2816 Alju-ChrAlju03 53801789 53802575 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2816 7 134 AS2 family AT3G58190 74.627 1.17e-68 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju03g2816 LOB 3.6e-36 No_clan