Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2812 ATGGCCACGAACATACGTCAATTGCTCAGAAGTATCTGTTTAAACACTGATTGGAAGTACGCCATCTTTTGGAGACTCCAACAAGGGGGTCGGATGATCCTAACATGGGAGGATGGCTACTATGACAACCCTGATGATTATGATTCTTTAGATGATGAGTGCTGCCAGAAGACCATGAAGCAGTTTCACAGTGGGTATTTTTCCCACGACCCTCTTGGGTTGGCGGTGTCAAAGATGTCATATCATGTATATTTGTTAGGGGAAGGTATTGTTGGACAGGTAGCTCTCACTGGGAAGCATCAGTGGATCTATGCAGATGATCATGCGACGAGTTCTGGTTTTTCCTTTGAGTCTGCTGATGGATGGCAGTCTCAGTTTTCTGCTGGAATTAGGACAATAGTTGTTGTAGCTATTACCCCACATGGAGTTGTTCAACTTGGCTCCTTAAATAAAGTGATTGAAGATACGAGAGTTGTAACTCATATCAGAACTATTTTTTTGGCCGGTCAAGATTACTCGATAGGCCATGTTCCCAATCATATACAATGTAGTGTGAAGAATTCTTCTTCTTCTTCGCCAGATGTACCAACAACAAAACTGTCTTCAAAAATTGGACCTGCTTGCTTACATGATACAGAGGAAACCATAAGGGGTGAAAAACTGGATATCTTCATGCCCTTTTCATGTTCTGCGGAGAACCTTACACCCTGTTCTGTTTGTCAGAAAATGGCTGTTAATGTGACCAAATGTGGGTGGCCTGAGTTTCACAGTGATGGAAGTTCGGTTTTGCTCAAGTCAGTATCAAATATGATGAATGTGGAGCATCAGAAATTTTTAGATGTGAGACCTCTAAATGAGAAGTTTGAAGGGGGAAGTAGTGGCTCCAAAGATATTAGGGTGGAAACAGAAAAAAATGTTACATCATTGTTACACAATTTGGTTATGGACAATAACTTAAGTGATTCTGTAGGTCCATCTGAAAAAATTGGAGCTGATTTGGCTTTCTTGCCTTCAGCAATTCATGATGTTTATGAAGGTGATAAGTTGTGTTATTTAAATATTAACCAGAAAGAGGCATTGACTCTTCCCAGATCTTTAGATGCAAGATCCGAAAAAGATACTATAAAGTCAGAGTTTCAGCCTGCACCTTCTTACAGGAGTACCTCAAATACATCGCTGAAATTCCCTGCTGGCTGTGAGCTACTTGAAGCCCTTGGACCAGCTTTTGCGAAAAGTGGATATTTTGATCCAGAGGGACAGGCGAATGAGGATGTTACAATGATGGAGATGCCAGATGAGATTAGCTGTAGCCAGTTGACTCGTGAATCTCATCCGGAGCATCTTTTAGAAGCAATAGTAGCCAATGCTTGTCATAGTAATAATGACATTAAGAGTGAACTATCATACTCTGCATCTGTGCAGTCTGCAACGATATCCGAAAGAAATCCTGAAGCTTCCATGCACGCTGCCCCTACTATTAATTCAGAGGGCTACTCAATAGAGTCTTCTCTTGTAAGAGAGGACATATTTCACTCTTTGACTTCATTGTCATGTCCTAGTTCATGTAGTGAACGGTTTGAAAGATCTTCTGAAACTGGTAAGGGCAAGAAGAGGGCTAGGCCTGGAGAGAGTGGTAGGCCTAGGCCAAGGGACAGACAACTGATCCAAGATCGTATTAAGGAGTTGAGAGAATTGGTGCCAAGTGGAGCAAAGTGCAGTATTGATTCACTACTGGAGCGCACGATAAAGCACATGCTCTTTCTGCAGAGCATTACCAAGCATGCTGACAAGCTAAATAAATTTACTGGTTCAAAGACAAAGTTGCATCACTTGGAATCAGCTGTTTCCGGATCCTCTAGCTATGAACAGGGGTCGAGTTGGGCAATGGAAGTAGGTGGTCATCTGAAAGTTCATTCAATATTAGTGGAGAATCTCAGTAAGAATGGACATATGCTTGTTGAGATGCTTTGTGAGGAGTGCAGCCATTTTCTGGAGATAGCTGAAGCCATAAGGAGCTTGGGCCTAACAATTTTGAAAGGTGCAACAGAAGCTCATGGTGAGAAGACATGGATATGTTTTGTGGTTGAGGGCCAAAACAACAGAAATGTACACAGGTTGGATATATTGTGGCCACTTGTTCAAATACTGCAGTCCAAGAGTACAATGCATGCATAA 2175 0.4198 MATNIRQLLRSICLNTDWKYAIFWRLQQGGRMILTWEDGYYDNPDDYDSLDDECCQKTMKQFHSGYFSHDPLGLAVSKMSYHVYLLGEGIVGQVALTGKHQWIYADDHATSSGFSFESADGWQSQFSAGIRTIVVVAITPHGVVQLGSLNKVIEDTRVVTHIRTIFLAGQDYSIGHVPNHIQCSVKNSSSSSPDVPTTKLSSKIGPACLHDTEETIRGEKLDIFMPFSCSAENLTPCSVCQKMAVNVTKCGWPEFHSDGSSVLLKSVSNMMNVEHQKFLDVRPLNEKFEGGSSGSKDIRVETEKNVTSLLHNLVMDNNLSDSVGPSEKIGADLAFLPSAIHDVYEGDKLCYLNINQKEALTLPRSLDARSEKDTIKSEFQPAPSYRSTSNTSLKFPAGCELLEALGPAFAKSGYFDPEGQANEDVTMMEMPDEISCSQLTRESHPEHLLEAIVANACHSNNDIKSELSYSASVQSATISERNPEASMHAAPTINSEGYSIESSLVREDIFHSLTSLSCPSSCSERFERSSETGKGKKRARPGESGRPRPRDRQLIQDRIKELRELVPSGAKCSIDSLLERTIKHMLFLQSITKHADKLNKFTGSKTKLHHLESAVSGSSSYEQGSSWAMEVGGHLKVHSILVENLSKNGHMLVEMLCEECSHFLEIAEAIRSLGLTILKGATEAHGEKTWICFVVEGQNNRNVHRLDILWPLVQILQSKSTMHA 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2812 724 MobiDBLite consensus disorder prediction 522 552 - -
Alju03g2812 724 MobiDBLite consensus disorder prediction 527 552 - -
Alju03g2812 724 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 722 IPR043561 GO:0003700|GO:0006355
Alju03g2812 724 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 166 IPR025610 -
Alju03g2812 724 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 539 588 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2812 Alju-ChrAlju03 53776603 53782063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2812 1 720 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 39.871 5.19e-155 466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1770 01 14346414 14349352 Alju03g2812 03 53776603 53782063 CCT
Alju03g2812 03 53776603 53782063 Alju03g2812 03 53776603 53782063 ECH