Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2809 ATGGCTACCTCGGACTCTGCTTTACCCGTATTCGCCATCGTCGTCATCAGCATCATGGCCACAGCTTTCTTGCTTATCGGCTACTTAACCTTCGTCACCAAATACTGCTCTTACTGGCACCACCTCAACCCTCTCACTTGGCTTTCCATTCTGCGTCCCAGACACAGCGAAGACCCCTTCATAGCTCTCTCCCCCGCCACGTGGAATCGAGGCCTTGATGAATCCATCATCCGAGAAATTCCCACATTCCAGTTCGTCAAAGGTGAGGATCATGATGTGAGTACTGTGTATGGTTGTGTGGTGTGCTTGAGTGAGTTTCAGCAACAGGACATGCTCAAGGTTCTGCCCAAATGCAGCCATGCTTTTCACTTGGACTGTATCGATATTTGGCTTCAGAGCAACGCCAATTGTCCTCTTTGCAGATCAAGCATTTCTGGCACCAGGCGTCCTCCATTGGATCATATTGTGGCACCAAGCTCTTCTCCTCAGGATTCTCAGTTACTCTCCAATATGGGTAGTGACGAAGACTTTGTGGTCATTGAATTGGGGGGAGAAGATGGGGGATCACTGTCACTGAGGCGACATGAACGAAATCTGTCAGGTGGGGGAAGCTTGGCGCAGAGTAGAAGTCACTCTGCGAGGAAGATGGAGCAGAAGATCGGGCACTTGAAATCGAGGAAGTGGCACCACGTGTCCATCATGGGAGATGAGTGTATTGACACGAGGAAGAAAGATGAACAATTCTGTATTCAGCCCCTTAGGAGATCTTTCTCCATGGATTCTGCAAATGATAGGCAAGTTTACTTGGAAGTTCAGGCCATTACACAGCAGTCAAATAGGCATCAGAACGAGGCTAGTGGGAGTGATGACAGTAACAGTAATAGCAGAGGTCGAAGGTCTTTCTTTCCATTTCGTTATGGTCGAGGATCCAAAAACGCAGTGCTTCCTCTGGAGAACGAGGTCTGA 966 0.4886 MATSDSALPVFAIVVISIMATAFLLIGYLTFVTKYCSYWHHLNPLTWLSILRPRHSEDPFIALSPATWNRGLDESIIREIPTFQFVKGEDHDVSTVYGCVVCLSEFQQQDMLKVLPKCSHAFHLDCIDIWLQSNANCPLCRSSISGTRRPPLDHIVAPSSSPQDSQLLSNMGSDEDFVVIELGGEDGGSLSLRRHERNLSGGGSLAQSRSHSARKMEQKIGHLKSRKWHHVSIMGDECIDTRKKDEQFCIQPLRRSFSMDSANDRQVYLEVQAITQQSNRHQNEASGSDDSNSNSRGRRSFFPFRYGRGSKNAVLPLENEV 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2809 321 MobiDBLite consensus disorder prediction 196 221 - -
Alju03g2809 321 SUPERFAMILY RING/U-box 98 145 - -
Alju03g2809 321 MobiDBLite consensus disorder prediction 277 299 - -
Alju03g2809 321 MobiDBLite consensus disorder prediction 277 304 - -
Alju03g2809 321 Pfam Ring finger domain 99 141 IPR001841 -
Alju03g2809 321 ProSiteProfiles Zinc finger RING-type profile. 99 141 IPR001841 -
Alju03g2809 321 PANTHER RING-H2 FINGER PROTEIN ATL16 4 318 IPR044600 GO:0016567|GO:0016740
Alju03g2809 321 CDD RING-H2_EL5-like 99 141 - -
Alju03g2809 321 FunFam E3 ubiquitin-protein ligase ATL6 62 147 - -
Alju03g2809 321 SMART ring_2 99 140 IPR001841 -
Alju03g2809 321 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 146 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2809 Alju-ChrAlju03 53742646 53743611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2809 2 281 C3H Transcription Factor Family AT1G04360 44.625 7.29e-76 236