Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2801 ATGGGGAGAGGAGCGTGCTGTGAGAAAATGGGATTGAAGAAAGGACCTTGGTCCTCAGAAGAAGACCACATACTCATCAATTACATCCAATCCCACGGTCACTCCAATTGGCGAGCCCTTCCCAAACAAGCTGGGCTTTTAAGGTGTGGCAAGAGTTGCAGACTGCGATGGACCAACTATTTGAGGCCTGATATCAAACGCGGCAACTTCACCCCCGAAGAAGAGAACATCATCTTCCGCTTGCACCATCTCTTGGGAAACAGGTGGTCGGCAATTGCAGCGAGATTACCGGGACGCACTGACAATGAAATAAAAAATGTGTGGCACACCCACTTGAAGAAGAGGCTCCCACTCAGCCAACAACAACACCTCCCCACTGCTCGCAACCCTAAACACAACAATCAAAACCCCGTCGCTTCTTCCTCCGATGACGACGACAACACACTGATCAAAACCCCACAATGCTCTGTCAGTATCAGTGATACCTCCACCCTCACTACCACTGACAACATCGAACCTAACGGTAACGACATGTCCACAAATGATGTCCAAATGCTGACCCATAGTATCGATACGACTTTGGACGAGGATTTCTGGTCGGAAGTCCTGTCGGCTCATAATTCCGGCGAAAGCAGCCAACTTGAAGGCGTGGGTGCTTATGCCGCTCACGCACACCTCCAATTTCCACTTTCTTCTGAAGCAAGTATTTGCGATGGTTTTAACATGGACTTTTGGGATGGTCATGTTTACACCAGACCCCACGAGTTAAATGAGTTATTACCACAATTATGA 792 0.4861 MGRGACCEKMGLKKGPWSSEEDHILINYIQSHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTPEEENIIFRLHHLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLPLSQQQHLPTARNPKHNNQNPVASSSDDDDNTLIKTPQCSVSISDTSTLTTTDNIEPNGNDMSTNDVQMLTHSIDTTLDEDFWSEVLSAHNSGESSQLEGVGAYAAHAHLQFPLSSEASICDGFNMDFWDGHVYTRPHELNELLPQL 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2801 263 FunFam MYB-related transcription factor 13 66 - -
Alju03g2801 263 CDD SANT 69 112 IPR001005 -
Alju03g2801 263 Gene3D - 69 144 - -
Alju03g2801 263 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Alju03g2801 263 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Alju03g2801 263 SMART sant 66 114 IPR001005 -
Alju03g2801 263 SMART sant 13 63 IPR001005 -
Alju03g2801 263 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Alju03g2801 263 MobiDBLite consensus disorder prediction 119 153 - -
Alju03g2801 263 CDD SANT 16 61 IPR001005 -
Alju03g2801 263 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Alju03g2801 263 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Alju03g2801 263 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Alju03g2801 263 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 213 - -
Alju03g2801 263 Gene3D - 11 67 - -
Alju03g2801 263 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2801 Alju-ChrAlju03 53686529 53687875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2801 1 203 MYB Transcription Factor Family AT1G06180 59.113 1.68e-77 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju03g2801 Myb_DNA-binding 1.1e-13 CL0123