Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2793 ATGGGTCTGAGAGATATAGGAGCATCACTTCCTCCAGGGTTTCGATTCTATCCGAGCGATGAGGAGCTGGTGTGTCATTACCTGTACAAGAAGATCACCGATGAGCAAATTCTCAAGGGCACTTTGGTCGAAATTGACTTGCATACTTGCGAACCATGGCAGCTGCCAGAGGTGGCGAAGCTGAACACAAATGAATGGTACTTCTTCAGCTTCCGTGACCGTAAATACGCCACAGGATTCCGGACAAACAGGGCGACGACATCTGGATATTGGAAAGCGACAGGGAAGGACAAGACAGTGCTGGACCCAATCACACGCGAGGTTGTAGGGATGAGGAAGACGCTGGTGTTCTACAGGAACAGAGCCCCCAATGGTATGAAAACTTGTTGGATCATGCATGAATTTCGCTTGGAGACCCCACACATGCCCCCCAAGGAGGACTGGGTTTTGTGTAGAGTGTTTCACAAAAGCAGAGAAGACAACAACTGTGCCAAACTCATCCCGCAGGATATGTTTGAGACTGCACCTTCAAATACTTTTCCTTCTTCATCTCCAACCAATCAAAATCAGCCTCCTGGCTTCTCCACTTTCACCTCCATGCCACATCATGATTACCAATACCAGAACCAAACCAGTTCTCTGATGAATCTCCTTCAATTCTCTCGGGAAACAAACACCCACAACACTACAAGTACTGTGACTACTCAAACTATTCCAATGAAAGGAGATCATGTTGGATATGACGATGGGTTCTTATGGGACATGGACCTGGAAGAAAACAGCATCCACCACCACCACAATGACGTCGCCTCAGATCTGGATGGAATGAGATTCGAGGTTGATAATGATAGTATGGTCTTTTTATAA 867 0.4671 MGLRDIGASLPPGFRFYPSDEELVCHYLYKKITDEQILKGTLVEIDLHTCEPWQLPEVAKLNTNEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDKTVLDPITREVVGMRKTLVFYRNRAPNGMKTCWIMHEFRLETPHMPPKEDWVLCRVFHKSREDNNCAKLIPQDMFETAPSNTFPSSSPTNQNQPPGFSTFTSMPHHDYQYQNQTSSLMNLLQFSRETNTHNTTSTVTTQTIPMKGDHVGYDDGFLWDMDLEENSIHHHHNDVASDLDGMRFEVDNDSMVFL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2793 288 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
Alju03g2793 288 Gene3D NAC domain 19 161 IPR036093 GO:0003677|GO:0006355
Alju03g2793 288 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Alju03g2793 288 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Alju03g2793 288 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 223 - -
Alju03g2793 288 MobiDBLite consensus disorder prediction 176 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2793 Alju-ChrAlju03 53614911 53618322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2793 6 241 NAC Transcription Factor Family AT1G56010 47.755 1.14e-67 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju03g2793 NAM 9.3e-38 No_clan