Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2786 ATGGCGCAGTTCTGCAGGTCCAGGGAGGCTCAAGTGTTAATTAACTCATCGTCGTTCTTCGACTTAAGCAAAACAAAAATCTTTTCCGCCGTCCATCATCCAGCTTTTTTGCTGCCTGGCGGCGTACTGAAGGTCTTGTTCATAATGGATCATGTGATTGCCGGCAAGTTTAAACTGGGAAGAAAAATTGGGAGTGGATCCTTTGGAGAGCTTTATCTAGGTGTCAACGTACAAACTGGAGAGGAGGTGGCTGTTAAGCTGGAACCTGTGAAGAGCAGGCATCCACAGCTTCATTATGAATCAAAATTATATATGCTTCTTCAAGGAGGAACGGGGATTCCTCACCTCAAGTGGTTTGGAGTTGAGGGAGACTACAATGTTATGGTTATTGACCTTCTTGGGCCAAGCTTAGAAGATTTGTTCAACTATTGCAACCGGAAGTTCAGCTTAAAGACAGTGTTGATGCTTGCTGATCAATGTATTAATAGAGTTGAATATATGCATTCAAGAGGATTTCTTCATCGTGACATAAAGCCTGACAATTTTTTAATGGGTCTAGGGCGCAAAGCAAACCAGGTTTACATCATTGATTATGGTCTTGGAAAGAAGTTTAGGGATCTACAGACTCATAAGCACATACCCTACAGAGAAAACAAGAACCTTACTGGCACAGCTCGCTATGCAAGTGTCAACACTCATCTTGGAATTGAACAAAGCAGAAGAGATGATCTGGAGTCTCTTGGTTATGTGCTCATGTACTTCTTAAGAGGAAGTCTTCCCTGGCAAGGTCTGAAGGCCGGCAACAAAAAGCAGAAGTATGATAAGATCAGTGAGAAGAAATCATCAACCCCAATAGAGGTTCTCTGCAAATCGTACCCATCTGAGTTTGTATCCTACTTCCACTACTGCCGATCATTACGGTTTGAGGACAAGCCAGATTATTCATATTTAAAGAGGCTTTTTCGAGATTTGTTTATTCGAGAAGGCTATCAGTTTGACTATGTTTTTGACTGGACCATATTGAAGTATCCTCAGATTGGTAGCAGCTCTAAAGGGCGGCTTGGCAATGGCAAGGCACTTATGAATGCAGGACCATCTGTACAAAAACCGGAAAAGATCCCAGCTGGGAAAGAGTTTCGGGAGAAATTTCCTGGTGGTGTTGAAGCATTTCCCCGACGGAATCCCACAGGTTCTAGTCCTCATGGTGATCACACCAAAAATAGGATTTTCGAGGAGGTAGCATCACGGAGGGATGTGTATGATCAAGAAAAGGGGCGCAGTTCCTCTCGTTATGGAAGCACTTCAAGAAAAGTGATAATCTCATCAAACCGGCAGAGTTCCTCCGGTGACCATACTGAAGGCCGTGCTGGCTGGCTGACATCAGGTGCCAACCGCCCATCAAGCGCATACAGAACTCAAGCTGTGCATGAGACTAAACAACCAAGTTTTACGCGCAATGGGTCTTCAAGAGCCACTCGTGAAGATGCTCTCAGGAGCTTTGAGCTGCTCTCTATTAGAAAGTAA 1524 0.4423 MAQFCRSREAQVLINSSSFFDLSKTKIFSAVHHPAFLLPGGVLKVLFIMDHVIAGKFKLGRKIGSGSFGELYLGVNVQTGEEVAVKLEPVKSRHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQCINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLGKKFRDLQTHKHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGNKKQKYDKISEKKSSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSKGRLGNGKALMNAGPSVQKPEKIPAGKEFREKFPGGVEAFPRRNPTGSSPHGDHTKNRIFEEVASRRDVYDQEKGRSSSRYGSTSRKVIISSNRQSSSGDHTEGRAGWLTSGANRPSSAYRTQAVHETKQPSFTRNGSSRATREDALRSFELLSIRK 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2786 507 ProSiteProfiles Protein kinase domain profile. 57 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2786 507 ProSitePatterns Protein kinases ATP-binding region signature. 63 86 IPR017441 GO:0005524
Alju03g2786 507 FunFam Putative Casein kinase I 49 133 - -
Alju03g2786 507 SUPERFAMILY Protein kinase-like (PK-like) 52 338 IPR011009 -
Alju03g2786 507 CDD STKc_CK1_delta_epsilon 56 330 - -
Alju03g2786 507 Gene3D Transferase(Phosphotransferase) domain 1 42 371 - -
Alju03g2786 507 MobiDBLite consensus disorder prediction 426 454 - -
Alju03g2786 507 FunFam Casein kinase 1-like protein 49 378 - -
Alju03g2786 507 MobiDBLite consensus disorder prediction 385 493 - -
Alju03g2786 507 PANTHER CASEIN KINASE-RELATED 55 447 - -
Alju03g2786 507 SMART serkin_6 57 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2786 507 MobiDBLite consensus disorder prediction 461 490 - -
Alju03g2786 507 MobiDBLite consensus disorder prediction 404 425 - -
Alju03g2786 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Alju03g2786 507 Pfam Protein kinase domain 58 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2786 Alju-ChrAlju03 53557778 53564141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2786 56 261 MAP Kinase Kinase Kinase AT3G06030 25.000 5.86e-13 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Alju03g2786 Pkinase 7e-25 CL0016