Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2780 ATGGGGGATAGGATCAGAGCAGATAGGAAACGCAATACCAAGAAAGGTGTGCGGAAGGTAATGAAGTGCTTATCTTGCTCAGAGGAGCCATCAAGAGAAGAAGATGATATGGTTCTTTCATCTGAAGCTCCTGCAAACAAGGGTTGTTCAGCAAATGGGATTTCTTTTCAGACCAGTCAAATTGACAAGATGCCAGATAATAGAAATATTGAGGAAATCGAATCATCCCTTTGTGGAAGTGGTTGTTTGAATTATGAGGAAGCTAGAGCTCGTTTAGGGAAATATGAATATCAGAAAGGAAATGTAGAAGCTGCTTTACATTTTTTTGAGCGAATAGATACGGAGGTTGTAACTTTGATGATTAAAAGTTCTCTTGCCAAAAGGGGAAAGCACCACAAGAGACTTCGCCAGAAATATGCTACGCGGTCATTGTCCATTCATTCTGCTAGCTTACTGTTGGAAGCATTATTCCTAAAAGCAAAGTCTCTGGAGGCTCTTGGAAAGTTTAAAGAAGCTGCCCTATGTTGCAAAGTTATTCTGGACATGGTTGAATCTTCATTACCCCAAGGCTTGCCTGAAAACTTTGGTGTTGGATGTAAATTGCAGGAGACTCTGAGCAAGGTGATTGAGTTGCTTCCTGAATTGTGGAAACTTGCAGATAGTCCATATGAAGCTGTTATGTCCTACCGCCGGGCACTTCTGCATAAGTGGAATCTTAATGCAGAAACCAAAGCAAAGATTCAGAAAGAGTTTTCTGTTTTTCTTCTATTTAGTGGAGAGGAAGCAAGTCCTCCCAGTCTTCGTTCCCAAATGGACACTTCATATGTACCCAGGAATAACATAGAAGAGGCTATACTTCTTTTGATGATTCTGTTAAGACAAGTCTATTCCAGTAGAATTGAGTGGGATCCTTCAATTTTGGATCATCTTTCATTTGCTTTGTCTGTTTCAGGGGATTTGACAGCTTTAGCCAATCAATTGGAACAATTGCTCCCCTCCACTGTCAACCCAACAGAAAAATGCCAAACAATTGCTTTCTGTTATTATGGAGCAGGTCAGGACTCGGTGGCATTGGGACTTCTTAGAAAATTGTTATGTAGAACAGAGGACCCAAAACATGTTTTAGCTTTGTTAATGGCTTCAAAGATTTGTTGTGAGAACTCTAATCTTGCTGGAGAAGGAATAAATTTTGCTTGCAGATTGCTTGAGAAATTGGAAGGAAGATGTGATCAGTTAGCAAGTTCTGCCAATTGCTTCCTTGGTCTTTCACTCTCAACACAGTCAAAATCGTCCGTTTCTGATTCTGAGAGGGATAGAAGACAATCTGAGGCACTTCACAGCCTGGAAATTGCCTCCAGAATGTCCAGAATGAGAAACCCCCTAATATTATACCATCTCAGTTTAGAATATGCTGAACAGAGAAAGTTGGATGCTGCCCTTTATTATGCCAAATGCTTGCTAGAACTGGAAGCAGGGTCTAATGTTAAAGGATGGTTATTATTAGCCAGGATATTATCAGCTCAAAGTCGATTTTTGGATGCTGAATCTGTTATCAATGCTGCTTTGGACCTGACTGGGAAATGGGAACAAGGAAATTTGCTGCGAACAAAAGCTAAACTTCAGATTGCACAGGGCCATTTAAGGAGTGGCATGGAAACGTATATTCAGCTTCTTGCTGTTCTTCAAATTGAGAGCACAAACTTTGGTTCTGAGAAGAAGCTAAACAACAAAGATGATATCCAGGGATTGGAAATGGAAATTTGGCATGATCTTGCTTTCTTATACATAGGCCAGTCAAAATGGCATGATGCAGAAGCGTGTCTTTCAAAATCTAAGGCCGTCAAACTATACTCTGCTTCTAGATGTCATGCAACTGGTCTAATATATGAAGTAAAGGGCCTTTATAAAGAGGCTCTAAAAGCTTATCGTGAAGCTTTGGATATTGATCCCAACCATGTCCCAAGCTTGGTTTCTAGTGCTCTGGTTCTCAGAAGGTGCGATAGTAAAAAATTGAATGCCGCAGTTCGAGGCTATCTTATGGATGCTCTAAGGCGTGACAGACGGAATGCTTCTGCTTGGTACCATCTTGGGCTTCTCCACAAGGCTGAGGGTTCTGTATCGTCATTAATGGAAGCCATGGAATGTTTCCAGGCTGCACACTGTCTTGAAGAAACTGCACCAGTTGAGCCTTTCAGATGA 2199 0.4116 MGDRIRADRKRNTKKGVRKVMKCLSCSEEPSREEDDMVLSSEAPANKGCSANGISFQTSQIDKMPDNRNIEEIESSLCGSGCLNYEEARARLGKYEYQKGNVEAALHFFERIDTEVVTLMIKSSLAKRGKHHKRLRQKYATRSLSIHSASLLLEALFLKAKSLEALGKFKEAALCCKVILDMVESSLPQGLPENFGVGCKLQETLSKVIELLPELWKLADSPYEAVMSYRRALLHKWNLNAETKAKIQKEFSVFLLFSGEEASPPSLRSQMDTSYVPRNNIEEAILLLMILLRQVYSSRIEWDPSILDHLSFALSVSGDLTALANQLEQLLPSTVNPTEKCQTIAFCYYGAGQDSVALGLLRKLLCRTEDPKHVLALLMASKICCENSNLAGEGINFACRLLEKLEGRCDQLASSANCFLGLSLSTQSKSSVSDSERDRRQSEALHSLEIASRMSRMRNPLILYHLSLEYAEQRKLDAALYYAKCLLELEAGSNVKGWLLLARILSAQSRFLDAESVINAALDLTGKWEQGNLLRTKAKLQIAQGHLRSGMETYIQLLAVLQIESTNFGSEKKLNNKDDIQGLEMEIWHDLAFLYIGQSKWHDAEACLSKSKAVKLYSASRCHATGLIYEVKGLYKEALKAYREALDIDPNHVPSLVSSALVLRRCDSKKLNAAVRGYLMDALRRDRRNASAWYHLGLLHKAEGSVSSLMEAMECFQAAHCLEETAPVEPFR 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2780 732 Gene3D Tetratricopeptide repeat domain 572 727 IPR011990 GO:0005515
Alju03g2780 732 PANTHER PROTEIN NPG1 21 732 IPR043376 -
Alju03g2780 732 SMART tpr_5 690 726 IPR019734 GO:0005515
Alju03g2780 732 SMART tpr_5 153 186 IPR019734 GO:0005515
Alju03g2780 732 SMART tpr_5 460 493 IPR019734 GO:0005515
Alju03g2780 732 SMART tpr_5 495 528 IPR019734 GO:0005515
Alju03g2780 732 SMART tpr_5 585 618 IPR019734 GO:0005515
Alju03g2780 732 SMART tpr_5 619 652 IPR019734 GO:0005515
Alju03g2780 732 SUPERFAMILY TPR-like 464 665 IPR011990 GO:0005515
Alju03g2780 732 SUPERFAMILY TPR-like 585 705 IPR011990 GO:0005515
Alju03g2780 732 Pfam Tetratricopeptide repeat 622 652 IPR013105 -
Alju03g2780 732 Gene3D Tetratricopeptide repeat domain 84 423 IPR011990 GO:0005515
Alju03g2780 732 Gene3D Tetratricopeptide repeat domain 433 544 IPR011990 GO:0005515
Alju03g2780 732 ProSiteProfiles TPR repeat profile. 619 652 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2780 Alju-ChrAlju03 53526457 53529818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2780 11 732 Calmodulin-binding Proteins AT4G28600 53.523 0.0 712
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g2780 03 53526457 53529818 Alju01g1709 01 13683678 13688363 CCT