Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2775 ATGACAAGCTTTCACAATGCTTCTGCTCTGTTCTTTCACGTACTCTTGCTATGTTTTCTTCCATCCAAGATAGCTGCATCACTGAGAGCAGAAGCAGAAGCAGAAGCTCTAGTGAAATGGAAAAACAGTTTGTCTCCTCCTCTTCCTTCTACTCTCAACTCATGGTCCCTCACCAATATGAACAATCTCTGCAATTGGGGTGCCATAGTCTGTGACAGCACTAACACAACAGTCTCAGAGTTAAACCTCTCTGGGGCCAATCTTACTGGCACACTTACGGGTTTGGATTTCACTTCTCTCCCCAATCTCACCCGCCTGGACCTCAGTGACAACGGTTTCAATGGGACTCTTCCTGCTGAGCTAGACCAGCTGAAAGAGCTTCAATATATCAATCTATACAACAACAACCTTAATGGGACCATTCCCTATCAGGTCACGAACCTCCAAAAGGTATGGCACCTAGACTTTGGATCAAATTACTTTGTTAATCCTCCTGACTGGTCAAAATATTCAGGCATGCCTTCCTTAACCCACCTCAGCTTGGCTCTCAACAGATTTACTTCTGAATTTCCAACCTTCATTCTAGAGTGTCAAAATTTGACCTATCTAGACATGTCCTATAATACGATCAGTCTAATACCAGAGTCAATGTATACCCGTCTGCAAAAGCTTGAATATCTAAATATGAGCTATTGTGAGCTAGAAGGACACTTGTCATCCAACTTGTTTAAGCTTTCCAATCTCAAAGAAATTCATATGGGTAATAACAAATTGATAGGTTCCATTTTCACGGATATAGGATCAATATCTGGACTTCAAGTTCTTGAATTGAATGACAATTTGTTCCAGGGGGAAATTCCTTCCTCTCTAGGCCAGCTTAGTGACTTGTGGCGTCTTGATCTCAGCCACAATTCCTTAAATTCTACCATTCCTTCTGAGCTTGGCCTTTGTACCAATCTAACTTACCTGGCTCTAGCAGCGAATTCTCTGATTGGTTCCTTGCCTATGTCGTTATCCAATCTGACAAAAATTAGAGAACTGGGTTTATCAGATAATCTCTTTACAGGTCAGATCCCAGCTTCGTTGATCTCTAAATGGACTGAGTTAATTTCTTTGCAATTTCAAAACAATAATTTCACGGGAGAAATTCCTGCATCAATTGACCTATTGACAAAAATTGATTTTCTTTTTCTATACAACAATACATTCTCTGGCACTATTCCTCCCGAGATTGGGAACTTGCAAGCAATGACAAATTTAGACCTTTCTTCAAACAAATTTTCTGGTCCAATTCCTTCAACCATATGGGGACTTAAAAACATTACAATCATAACTCTTGCCTCAAATAACCTCTCAGGAACCATCCCCATGGAAATTGGAAACCTTACTTCATTGATAACTTTTGATGTCAACAATAATTTTCTCCATGGTGTGTTGCCCAAGACTATTTCCCAGTTAAAAATGTTGCAGAATTTTTCTGTATTCACCAACAAGTTTTCGGGCAGCATTCCCAGAAATTTTGGGAAGTATAGCCCTGATTTGAAAGTAGTCTTTCTTTCAAATAACAGCTTCTCCGGAGAACTGCCTCCTGATTTGTGCGGCGGTTTTGCACTTGAGGACTTGAGGGTGAATAACAACAGTTTTTCTGGACCACTGCCCAAGTGCTTGAGAAATAGTTCGGCATTAACACTGGTGAAGCTTGAAAAAAATCAATTCATAGAAAACATCACAGAAGCATTTGGCATTTACCCAAATCTTACATCCATCACACTCAGTGGCAATCAGTTTGTTGGTGAACTCTCCCCAAAATGGAGTGAATGCAAGAAATTAACGAGGATAGAAATGGATAACAACAAACTTTCTGGGAAAATTCCATCTGAATTGAGCTTGTTAAGCCAATTACAACATCTAAGCCTGCACTCCAATCAATTTACGGGCAGCATTCCACCGGAAATGGGAAATCTTAGGCAACTTTACTTGTTCAACTTGAGCGGTAATCATTTGACAGGAGAAATCCCCCAGAGTCTTGGCAGATTGGGCCGCCTTAATTATCTTGATTTATCAAAGAACAGCTTAAATGGAAGCATACCAAAGGAGCTCAGTAACTGTGGCAGTTTAATTAGCTTGAATTTGAGCCATAACAATTTAACTAGGGAGATACCATCTGAACTTGGCAATCTGTTTTCGCTCCAATACTTTCTGGACCTCAGCAGCAACTTTCTTTCAGGGCAAATTCCTCAGAACCTGGAAAAGCTCATTCATTTGGAGATCCTCAATGTCTCACGCAACCATCTTTCAGGGACAATCCCACAATCATTCTCAAGTATGCTCAGTCTTCAATCCATCGATTTTTCTTACAACAGCTTGACGGGTCCTATCCCAACTAGGGGTATTTTCCAAACAGCACCTACTGAAGCTTATGTAGGAAATTCTGGTTTGTGTGGCAAGGCAAAAGGATTTATTGCTTGTTCCATAAAAGCATCCCAAGACAGATCTGGAGGGGTCAACAAAAAGGTACTGCTTGGTGTTTTTATACCAATTGGTGCGTTACTAATTTTCGGGGTGATTGTTGTTACTGTTAGAATCCGAGTTTTTCACCAACGGACCGCACTTCCTGACGAAGAGTCCAGAGATGCTCAAAGGAATGAAAAAACTGCAAGCATGATTTGGGGAAGAAAGGAAAAATTCACATTCACTGAAATAGTTAAAGCCACAGATGACTTCGATGACAAATACTGCATTGGAAAAGGAGGTTTTGGAAGTGTTTACAGAGCAGAATTACCTACAGGCATAGTTGTCGCCGTCAAAAGACTCAAGATCTCAAACTCCAGCGACATTCCAGTCGAGAATCTTCGGAGTGTTGAGAATGAGATAAATACCCTTACCGAAGCAAAACACCGCAATATCATAAAGCTTTATGGTTTTTGTTACAGCCAGGAAAGCGCATACTTGGTTTACGAATATGCAGAAAGAGGCAGCCTAGGAAAAGTGTTGTACGGAGAGGAAACGAAGACGATATTAAGCTGGCCTCAAAGGGTGAAAATTGTGCAGGGGATAACACAAGCAATAGTTTACCTACACAGTGATTGTATCCCACCAGTTGTGCATCGAGATGTGACGTTGAATAACATATTGTTGGACTCAGAATATGAACCCCGCCTTGCAGATTTCGGCATAGCAAAGCTTCTTAGGTCCAATTCAACAAGCTGGACCTCAATTGCTGGCTCCTATGGCTACATGGCTCCAGAGCTAGCACAAACAATGCGGGTAACAGAGAAGTGTGACGTTTATAGTTTTGGAGTGGTGGTATTAGAGATAATACTGGGAAAGCACCCTGGCGATTTCTTGGCCACATTGCCATCAATGGAGAATCCACAAGTGTTGGTGAAAGATGTGATAGACCAAAGACTCCCACCTCCCCCAGCTCGATTGGGTGAAGCGATAGCCTTTATAATGACCATAGCCTTGGCATGCACGCGAACGTACCCCGAGTCTAGACCAACCATGCATTTTGTGGCCCAGCAATTATCGGCTCTTGAGCAAACATCTCTTGTTGAACCCTTTAGCACAATAACCCTAAACAAGCTAACGAGGTTTCATAGGTAG 3606 0.416 MTSFHNASALFFHVLLLCFLPSKIAASLRAEAEAEALVKWKNSLSPPLPSTLNSWSLTNMNNLCNWGAIVCDSTNTTVSELNLSGANLTGTLTGLDFTSLPNLTRLDLSDNGFNGTLPAELDQLKELQYINLYNNNLNGTIPYQVTNLQKVWHLDFGSNYFVNPPDWSKYSGMPSLTHLSLALNRFTSEFPTFILECQNLTYLDMSYNTISLIPESMYTRLQKLEYLNMSYCELEGHLSSNLFKLSNLKEIHMGNNKLIGSIFTDIGSISGLQVLELNDNLFQGEIPSSLGQLSDLWRLDLSHNSLNSTIPSELGLCTNLTYLALAANSLIGSLPMSLSNLTKIRELGLSDNLFTGQIPASLISKWTELISLQFQNNNFTGEIPASIDLLTKIDFLFLYNNTFSGTIPPEIGNLQAMTNLDLSSNKFSGPIPSTIWGLKNITIITLASNNLSGTIPMEIGNLTSLITFDVNNNFLHGVLPKTISQLKMLQNFSVFTNKFSGSIPRNFGKYSPDLKVVFLSNNSFSGELPPDLCGGFALEDLRVNNNSFSGPLPKCLRNSSALTLVKLEKNQFIENITEAFGIYPNLTSITLSGNQFVGELSPKWSECKKLTRIEMDNNKLSGKIPSELSLLSQLQHLSLHSNQFTGSIPPEMGNLRQLYLFNLSGNHLTGEIPQSLGRLGRLNYLDLSKNSLNGSIPKELSNCGSLISLNLSHNNLTREIPSELGNLFSLQYFLDLSSNFLSGQIPQNLEKLIHLEILNVSRNHLSGTIPQSFSSMLSLQSIDFSYNSLTGPIPTRGIFQTAPTEAYVGNSGLCGKAKGFIACSIKASQDRSGGVNKKVLLGVFIPIGALLIFGVIVVTVRIRVFHQRTALPDEESRDAQRNEKTASMIWGRKEKFTFTEIVKATDDFDDKYCIGKGGFGSVYRAELPTGIVVAVKRLKISNSSDIPVENLRSVENEINTLTEAKHRNIIKLYGFCYSQESAYLVYEYAERGSLGKVLYGEETKTILSWPQRVKIVQGITQAIVYLHSDCIPPVVHRDVTLNNILLDSEYEPRLADFGIAKLLRSNSTSWTSIAGSYGYMAPELAQTMRVTEKCDVYSFGVVVLEIILGKHPGDFLATLPSMENPQVLVKDVIDQRLPPPPARLGEAIAFIMTIALACTRTYPESRPTMHFVAQQLSALEQTSLVEPFSTITLNKLTRFHR 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2775 1201 Gene3D Ribonuclease Inhibitor 30 167 IPR032675 -
Alju03g2775 1201 Gene3D Ribonuclease Inhibitor 256 364 IPR032675 -
Alju03g2775 1201 Gene3D Ribonuclease Inhibitor 365 481 IPR032675 -
Alju03g2775 1201 Gene3D Phosphorylase Kinase; domain 1 871 988 - -
Alju03g2775 1201 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 411 507 - -
Alju03g2775 1201 CDD STKc_IRAK 914 1176 - -
Alju03g2775 1201 PANTHER LEUCINE RICH REPEAT KINASE 2 459 1180 - -
Alju03g2775 1201 Pfam Leucine rich repeat 584 644 IPR001611 GO:0005515
Alju03g2775 1201 Pfam Leucine rich repeat 174 234 IPR001611 GO:0005515
Alju03g2775 1201 Pfam Leucine rich repeat 656 716 IPR001611 GO:0005515
Alju03g2775 1201 Coils Coil 1199 1201 - -
Alju03g2775 1201 Pfam Protein kinase domain 911 1114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2775 1201 Gene3D Ribonuclease Inhibitor 482 820 IPR032675 -
Alju03g2775 1201 Pfam Leucine Rich Repeat 754 775 IPR001611 GO:0005515
Alju03g2775 1201 SUPERFAMILY Protein kinase-like (PK-like) 887 1176 IPR011009 -
Alju03g2775 1201 SUPERFAMILY RNI-like 80 404 - -
Alju03g2775 1201 SUPERFAMILY L domain-like 389 500 - -
Alju03g2775 1201 SUPERFAMILY RNI-like 479 791 - -
Alju03g2775 1201 ProSitePatterns Protein kinases ATP-binding region signature. 914 936 IPR017441 GO:0005524
Alju03g2775 1201 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1034 1046 IPR008266 GO:0004672|GO:0006468
Alju03g2775 1201 FunFam MDIS1-interacting receptor like kinase 2 171 363 - -
Alju03g2775 1201 FunFam Nuclear pore complex protein NUP107 30 164 - -
Alju03g2775 1201 ProSiteProfiles Protein kinase domain profile. 908 1189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2775 1201 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 511 827 - -
Alju03g2775 1201 SMART LRR_typ_2 776 801 IPR003591 -
Alju03g2775 1201 SMART LRR_typ_2 414 438 IPR003591 -
Alju03g2775 1201 SMART LRR_typ_2 704 727 IPR003591 -
Alju03g2775 1201 SMART LRR_typ_2 631 655 IPR003591 -
Alju03g2775 1201 SMART LRR_typ_2 198 220 IPR003591 -
Alju03g2775 1201 SMART LRR_typ_2 679 703 IPR003591 -
Alju03g2775 1201 SMART LRR_typ_2 100 124 IPR003591 -
Alju03g2775 1201 SMART LRR_typ_2 462 485 IPR003591 -
Alju03g2775 1201 SMART LRR_typ_2 341 365 IPR003591 -
Alju03g2775 1201 SMART LRR_typ_2 752 775 IPR003591 -
Alju03g2775 1201 SMART LRR_typ_2 173 197 IPR003591 -
Alju03g2775 1201 SMART LRR_typ_2 293 317 IPR003591 -
Alju03g2775 1201 SMART LRR_typ_2 221 245 IPR003591 -
Alju03g2775 1201 FunFam Leucine-rich repeat receptor protein kinase MSP1 872 988 - -
Alju03g2775 1201 Gene3D Ribonuclease Inhibitor 168 255 IPR032675 -
Alju03g2775 1201 Pfam Leucine rich repeat N-terminal domain 31 72 IPR013210 -
Alju03g2775 1201 Gene3D Transferase(Phosphotransferase) domain 1 990 1190 - -
Alju03g2775 1201 FunFam MDIS1-interacting receptor like kinase 2 989 1182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2775 Alju-ChrAlju03 53494166 53497859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2775 10 625 Receptor kinase-like Gene Family AT4G08850 30.062 5.21e-71 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju03g2775 Pkinase 2.3e-45 CL0016