Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2773 ATGGAAATTTGTGGCCCACAAAAAATATCCAATCTCACCGATTCATTCTGTCTTTTTTTTTTTTTTCTTTTCCTTTTCTGGGTTCTTTCACTGTACTTTCTTGTGATTCTTCTGTTGACTATCTGGGAATCCAAAGATTTAAGGGGCAAAGCGCACTCTCCACCGTTGCCCACTTCCATACCTTGCCGGTGGCCGAATTTACAAACACCCGTCTGTTTCTTTAAGAACTGCTTCCTGCTTTCGATTCGATTCTCAGCCCTTCGGTTCGATTTTTTCTTAGCTTCCCGCGAACTTTTCGGACTGAAGATTGATGACACACCGTCTGGTTTGGGCTTCAAGAACAAGCAATTTGCCTTGTATTGTCTCTGGGAAATAATGGCAGCACGCACAACTTCTTCTATTGAAAGGTCAAGCACTAAGCAGCTCAATAACATGGGGATGTCTGGACCATTGCCGTCATCCTTCTCAGTTCTTCCAACACCGATGGGAGAGACATTTGCCAAGTTTTCTGATTCTCAGCTGGCCATCATGGCAAAAGAACTTGTGTCTGGGCCTATAACTCAGCCGAGTCATTTAAATTCCAGCGGAGCAGTTGGGCACATGTTTTCATCTTCCCCGGGATGTTCAACTGATCTTCATCACTCATCTCTCTTGCCTCATGAAATACACTCAACAAGTAATCATTTCATTTCACAGTCATCCAGTGACAAGGGTTCTTTGCCATTTTCTTATTCTTCCAATAGCGGACCACTTCCTTCTTCTGCACCAAATAATTATTTCAAAGAAAACAGTGCTTCCTGGAATATAGAACCCCTGCCCAACTTTCTTGATTTCCCTGCAAATACTGCCATCGAGAATGGTCAAGCAGAAAACAGTGCCTGCACTGTCATGGCATCTGAAGAGTATGTTAAGCGAAATGAATGGCAAGAGTGGGCTGACCAGCTTATAAGTGAAGATGACCCTTTGACTTCTAATTGGAATGACCTTCTTACTGACAACGTTCAAGATCTTGAACCAAAGGTCGGATGCCAGCTTCCACATATTCCAGGAAACCAGTCCCAAGGTCAGCAGCTACTTCCTGCTTCATCTGGAGACAATTGCTTTGGTGCTCCCCCAGCTTCTGCAGCAAGTTCTGCTCCTGCCAAGCCACGGATGCGCTGGACACCAGAGCTTCATGAGGCCTTTGTGGAGGCTGTCAACAAACTTGGTGGCAGTGAAAGAGCTACCCCTAAGGGTGTGCTGAAGCTCATGAAAGTTGAAGGATTAACTATATATCATGTTAAAAGTCACCTGCAGAAATACAGGACTGCTAGATATAGACCGGAACCATCTGAAGGATCCTCAGAGAAACGAGTAACTTCCATTGAAGATATGCCTCCTCTAGACTTGAAAACTGGTATCGAGATCACTGAAGCTCTGCGGCTGCAGATGGAGGTTCAGAAGCGGTTGCATGAGCAACTTGAGATTCAACGAAACCTACAACTACGAATAGAAGAACAAGGAAGGTACCTTCAAATGATGTTTGAGAAGCAATGCAAATCTGGCGCAGACAAGAAGGCATCATCAGCATCTGCCACAGAGAATCCATCTGGAGTGTCTTCAGATGCTATCAAAGATTGTCCTGCCAAAGGTGAGGCGGAAACCTCCCAAGTGGCGGGCAATTGCAAGTCAGGGCGAGATCAAGCTAATAGCAATATTGCAGTTGAGGAAAGCTCTCTGGAAGTGGGTATGAAGAATGATGGTCCTGAAAATCAAGCTTCTGATAATGCTAAGCAACAAAACAGTGAAGAGAGTGCTCCAGCCTCGAAGAGGCAGAGGGCAGACAAGTAA 1830 0.4508 MEICGPQKISNLTDSFCLFFFFLFLFWVLSLYFLVILLLTIWESKDLRGKAHSPPLPTSIPCRWPNLQTPVCFFKNCFLLSIRFSALRFDFFLASRELFGLKIDDTPSGLGFKNKQFALYCLWEIMAARTTSSIERSSTKQLNNMGMSGPLPSSFSVLPTPMGETFAKFSDSQLAIMAKELVSGPITQPSHLNSSGAVGHMFSSSPGCSTDLHHSSLLPHEIHSTSNHFISQSSSDKGSLPFSYSSNSGPLPSSAPNNYFKENSASWNIEPLPNFLDFPANTAIENGQAENSACTVMASEEYVKRNEWQEWADQLISEDDPLTSNWNDLLTDNVQDLEPKVGCQLPHIPGNQSQGQQLLPASSGDNCFGAPPASAASSAPAKPRMRWTPELHEAFVEAVNKLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPEPSEGSSEKRVTSIEDMPPLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGADKKASSASATENPSGVSSDAIKDCPAKGEAETSQVAGNCKSGRDQANSNIAVEESSLEVGMKNDGPENQASDNAKQQNSEESAPASKRQRADK 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2773 609 MobiDBLite consensus disorder prediction 550 570 - -
Alju03g2773 609 NCBIfam myb-like DNA-binding domain, SHAQKYF class 382 436 IPR006447 GO:0003677
Alju03g2773 609 Coils Coil 470 490 - -
Alju03g2773 609 MobiDBLite consensus disorder prediction 582 600 - -
Alju03g2773 609 Pfam Myb-like DNA-binding domain 384 435 IPR001005 -
Alju03g2773 609 MobiDBLite consensus disorder prediction 436 455 - -
Alju03g2773 609 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 361 598 IPR044848 GO:0003700
Alju03g2773 609 SUPERFAMILY Homeodomain-like 380 436 IPR009057 -
Alju03g2773 609 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 379 439 IPR017930 -
Alju03g2773 609 Gene3D - 381 440 - -
Alju03g2773 609 MobiDBLite consensus disorder prediction 515 609 - -
Alju03g2773 609 Pfam MYB-CC type transfactor, LHEQLE motif 467 514 IPR025756 -
Alju03g2773 609 MobiDBLite consensus disorder prediction 517 533 - -
Alju03g2773 609 FunFam Myb family transcription factor 381 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2773 Alju-ChrAlju03 53473328 53483565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2773 134 552 G2-like Transcription Factor Family AT4G28610 46.528 3.73e-99 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju03g2773 Myb_DNA-binding 6.7e-09 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1705 01 13613899 13619035 Alju03g2773 03 53473328 53483565 CCT
Alju03g3361 03 57459220 57462342 Alju03g2773 03 53473328 53483565 CCT
Alju03g2773 03 53473328 53483565 Alju03g2773 03 53473328 53483565 ECH
Alju01g1705 01 13613899 13619035 Alju03g2773 03 53473328 53483565 ECH