Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2767 ATGTGCTACAATAACAATGTATGGTGTTCCTTTTTCTCAAATTTGAGTGTGGCTATTGCAATTTGGGACAGATTTCAACCAAGACCGAAGTGTGAAATGTTTGCTAAGAGGCTGAGTTCCTTCCTCAGAAGCTTTTCAAAACCCCAGATTTCCAGGTCCATAAAAGATGTAGAAGAGGAGAGTAAGCCTTACGTTCGCAAGGCAGTTTCATTTGTTTTGATTACCATTACTGGTGGAGTTGCTCTTAGTGCGCTGGATGACCTTGCTATCTATCAAGGCTGTAGTAGCAAGGCCATGGAGAAAGTGAGCAAGAACGAGGTGATGATAGAGGCTCTTGGGGAACCAATCGTTAAAGGTCCATGGTACAATGCGTCTCTTGCAGTAGCTCATAAGAGGCATTCTGTGTCTTGCTCATTTCCTGTTTCGGGGCCACAAGGTACAGGGATATTACAACTGAAGGCAGTTCGTAATGGAGATGATACTTGGTCTTCATTTTTCCTTCCTCGGGATTGGGAGATTTTAATCATGGATGCTCTTCTGCATGTACCTGGAAATGAGGAGAAGCGCCAAACGTTGCGGATTGATCTCTCTGAAAGGCTGCCAACTTCTTGCACTGCATGCACCGAGTGCATACCTCGTACCGCGCAGAACGCAGAGACCAAATGTAGTAATCAACCGATTCGGGGCAGAGCATTGGACATTTGGACTGGTGGAGGAGGAGGCAACGTGTGGGAGAACGTGTCTCCTGGTTGCTACACAACTTATCATCATGAATTTAGAAATATCTGTGTGGAGTGCAATGCAAAGAAGGCAAAACGTCTAGAAGGAGGAGAAAAGTACAAGGTTTTAGGAGACATTGATGGAGGCGCACAAAGGAGACATGTGGGTCATCCCGCAATCACCACCCCTTCGTTCCCACGGCACCTATCCATCTCCTTCCCCTTCCTCAACAGCACACCTAACCTCTTCATTTATCCTTTCTTTCCCTTCACTGTTTTTCCAGACGCATTAACCCCTGTACCTTCTTCCTCTCTGCCCTTCGCCTTTTACTTCCTGTTCTATTCGATGCAGGGTGATTCTTCTCCGGATTCGATGCTCACGGAGTCTAAGGAGGATAATTTGATCCTTTCTTCCGAGGACTCGTCTTGCCCTCAGGAGTCCGAGCTTGAATTGGGTCTTGGCTTGAGCCTCTCTCATCCTCGACTCAAGTCTCAGCCACCTCCTACGACTCAGTTTACTCGAATCTTGACGGCTATGGATTTTTCTTCATCTGCCTCCTCCTCCTCCTCCTCTCCTAGCGTGGCAGCTGGTACCAAGAGAGCTGCTGATTCTCTTATCGCTGCAAACGGTCCCAGTCAAGTTGTTGGATGGCCTCCTCTTCGAGCATATAGAATGAACAGCTTTAATAATAATCACTCAAAATCTCAAGCCACCGAAGTGAAGAGTAATCAAACAGCTGCAAGGAAGATTACTGACAATGGCAGTAATAGAAACAATAGTACTACCGAAGAAAAAACACACATCAGGAGATCCTTCTTTGTGAAGGTAAATATGGATGGGACACCAATTGGAAGGAAGGTCGATTTGAGTGCTCATAGTTCCTATGAAACCTTGGCACACACTTTGGAGGATATGTTTAATGAACGGACTCCAGTTGTCACCAAAGGATTAAATGGGGAGGATCGTGGTATTGTCATTGGAGCAAAAAAGAGAGACTTAAACTTGCTGGTTGAATCTTCCAATTTTGTGCTAACTTATGAAGACAAAGAAGGAGACTGGATGCTTGTTGGGGATGTTCCTTGGGATATGTTTCTTAATTCTGTGAGGAGGCTTAGAATTATGAGGACGTCTGAGGCAAATGGACTTGCGCCAAGATTGGAGGAAAAGAAGAGCAGACTGAGAAGTGAACGCATATAG 1917 0.4554 MCYNNNVWCSFFSNLSVAIAIWDRFQPRPKCEMFAKRLSSFLRSFSKPQISRSIKDVEEESKPYVRKAVSFVLITITGGVALSALDDLAIYQGCSSKAMEKVSKNEVMIEALGEPIVKGPWYNASLAVAHKRHSVSCSFPVSGPQGTGILQLKAVRNGDDTWSSFFLPRDWEILIMDALLHVPGNEEKRQTLRIDLSERLPTSCTACTECIPRTAQNAETKCSNQPIRGRALDIWTGGGGGNVWENVSPGCYTTYHHEFRNICVECNAKKAKRLEGGEKYKVLGDIDGGAQRRHVGHPAITTPSFPRHLSISFPFLNSTPNLFIYPFFPFTVFPDALTPVPSSSLPFAFYFLFYSMQGDSSPDSMLTESKEDNLILSSEDSSCPQESELELGLGLSLSHPRLKSQPPPTTQFTRILTAMDFSSSASSSSSSPSVAAGTKRAADSLIAANGPSQVVGWPPLRAYRMNSFNNNHSKSQATEVKSNQTAARKITDNGSNRNNSTTEEKTHIRRSFFVKVNMDGTPIGRKVDLSAHSSYETLAHTLEDMFNERTPVVTKGLNGEDRGIVIGAKKRDLNLLVESSNFVLTYEDKEGDWMLVGDVPWDMFLNSVRRLRIMRTSEANGLAPRLEEKKSRLRSERI 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2767 638 PANTHER CYTOCHROME OXIDASE COMPLEX ASSEMBLY PROTEIN 33 214 - -
Alju03g2767 638 Gene3D - 506 628 - -
Alju03g2767 638 Pfam Cytochrome oxidase complex assembly protein 1 91 160 IPR014807 -
Alju03g2767 638 SUPERFAMILY CAD & PB1 domains 506 614 - -
Alju03g2767 638 MobiDBLite consensus disorder prediction 362 382 - -
Alju03g2767 638 Pfam AUX/IAA family 421 625 IPR033389 -
Alju03g2767 638 ProSiteProfiles PB1 domain profile. 511 618 IPR000270 GO:0005515
Alju03g2767 638 MobiDBLite consensus disorder prediction 470 501 - -
Alju03g2767 638 FunFam Auxin-responsive protein 506 626 - -
Alju03g2767 638 MobiDBLite consensus disorder prediction 470 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2767 Alju-ChrAlju03 53436938 53446025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2767 514 625 B3 DNA Binding Superfamily AT1G59750 32.143 5.82e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Alju03g2767 AUX_IAA 1.3e-60 CL0072