Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2749 ATGCCAACTTCGATCGTCTTCTTCCTTGTTCTTCTTAACCTGCTTATCTCTTGCTCAGGTTATTTCTCTTTGACAATATTCATGTCGCCTTCTCCGAAACCATACCAGGCATTGTCTGTCAAGGAAATGTTATTTAAGCAGGTGAACTCAGTTTCCACTAGTGTATCATTTGCTTCACATAAACCAGCTAAAACTTGGTTGGTTAAGCCTTCTTTGGGGCCTTCTTTGGCACCTGCACCATCTCCATCTGACCAAGGTCCAAGCGTGCATCCTAGTCCAAGACACCACCACCACCATCATCACCGTGGCGTAAGACCTCATGTAGTAGCTCCATCCCCTTCTAAAGATCAAGGTTGTGACCAAATATGTACTGATCCACTCACAGCGACCCCCTTTGGTTCACCTTGTGGCTGCGTCTTTCCCATGAAAGTCAAACTTATTTTGGATGTTGCACCTTATGCAATTTTTCCATTAATGAATCAGTTAGAGATTGAGGTTGCATCAGGGACATATTTGGAACAGAGCCAGGTGAAGATAATGGGTGCAAGTGCTGACAGTCAAAATCAGGGAAAAACTGTAATTGATACGAACTTGGTTCCATTGGGAGAGAAGTTTGACAACACCACTGCGGTTCTGATATATGAGAGGTTTTGGCATAAGAAAGTTCCTCTAGATAGGAGCCTTTTTGGTGATTATGCAGTCCTGTCCATTAGTTATCCAGGGATTCCGTCATCACTGCCATCTGGAAGCAATGTTGGAAGTGGTCCTAGTGGGAGTGCCAGTGGTCTTCCGATCACTGCCAACTTTGTCAGCAAGAACCAGAAAATGAATCTTAGAACCATAGTCATCATTGCTTTATCTGCCTTTGTACTCATGTTGGTTTTGATTGGAGCGTTTTCCATCATGTTGAAGTGGAGGAGGATTAGGAGGCCATCAAGCGCTGTTGGTCCTGCATTTACTTCATCTATGAACAAGCGATCAGGCATGGGGTCTATGTTGTCAAGCAGTATTACAAGCTCAACATCAGTGTCCCTTATGTCCACCATGGCTACTTCTATCCTCTCTGTTAGAACATTTTCACTTTCTGAGGTTGAGAAAGCAACAGATAAGTTCAGTTCAAAGAGAGTATTAGGAGAAGGTGGATTTGGGCGTGTTTATAGTGGGACATTGGAAGATGGAACTGAAGTAGCAGTTAAGCTGCTGACAAAGGATAATCAGAATGGAGACCGTGAGTTTATTGCAGAAGTTGAGATGCTAAGCCGCTTGCATCACCGCAATCTTGTGAAACTCATTGGTATCTGCATTGAAGGGCGTAGACGGTGCTTGGTGTATGAGCTAGTTCGCAATGGCAGTGTTGAGTCCCATTTGCATGGTGTTGACAAGAAGGGTCCTCTAGATTGGGAAGCGAGGATGAAAATTGCTCTTGGAGCAGCGAGAGGGTTGGCCTATCTCCATGAAGACTCTAATCCTCGTGTAATTCATCGAGACTTCAAAGCTAGTAATGTGTTATTAGAAGATGATTTCACCCCTAAGGTTTCTGATTTTGGCTTGGCAAGAGAAGCAACTGAAGGAAGTCATCATATTTCTACGCGTGTCATGGGAACTTTTGGGTATGTTGCACCGGAATATGCAATGACAGGCCATTTACTTGTTAAGAGTGATGTTTATAGCTATGGGGTAGTGCTGCTTGAACTTCTTACCGGCAGAAAACCAGTGGACATGTCTCAACCTCCTGGACAGGAGAATCTAGTGACATGGGCAAGGCCACTCTTGACGAGTAGAGAAGGCTTAGAACAGCTAGTGGATCCATCTTTGGCTGGAAGTTATGACTTTGACGACATGGCAAAGGTGGCCGCCATCGCCTCCATGTGTGTCCACCCCGAGGTCACTCAGAGACCTTTTATGGGTGAAGTTGTGCAGGCTCTGAAATTGATATACAACGACACAGATGAGACTTGTGGGGATTGTTGTAGTCAGAAGGAGTCTTCTGCTCAAGAATCTGACATTAGAGCTGATCTTGTTCCATCAGATAGCAGTTGGTGGAATGCCGGAGGGGTGACCCCGAGGCTAACTTATGGTCAAGCATCTTCCTTCATCACAATGGAATACAGTTCTGGCCCACTTGAAGAAATGGAAAACAGGCCGTTTTCAACTTCAAGCTTACTAGGAGACGAGATATCTTCACCAATTATGCATGGGAATAGATCAGGGCCCTTAAGGTCAGTCCGAAGCAAGCTATCTTTGTATAGATTTACCGGAAGTCGGAGTGAACATGGGGGACTACATTCCAAGCGTGGTTTAAACGATGGTTTTTGGGTTTAA 2322 0.4479 MPTSIVFFLVLLNLLISCSGYFSLTIFMSPSPKPYQALSVKEMLFKQVNSVSTSVSFASHKPAKTWLVKPSLGPSLAPAPSPSDQGPSVHPSPRHHHHHHHRGVRPHVVAPSPSKDQGCDQICTDPLTATPFGSPCGCVFPMKVKLILDVAPYAIFPLMNQLEIEVASGTYLEQSQVKIMGASADSQNQGKTVIDTNLVPLGEKFDNTTAVLIYERFWHKKVPLDRSLFGDYAVLSISYPGIPSSLPSGSNVGSGPSGSASGLPITANFVSKNQKMNLRTIVIIALSAFVLMLVLIGAFSIMLKWRRIRRPSSAVGPAFTSSMNKRSGMGSMLSSSITSSTSVSLMSTMATSILSVRTFSLSEVEKATDKFSSKRVLGEGGFGRVYSGTLEDGTEVAVKLLTKDNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRRRCLVYELVRNGSVESHLHGVDKKGPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSHHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVTWARPLLTSREGLEQLVDPSLAGSYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDTDETCGDCCSQKESSAQESDIRADLVPSDSSWWNAGGVTPRLTYGQASSFITMEYSSGPLEEMENRPFSTSSLLGDEISSPIMHGNRSGPLRSVRSKLSLYRFTGSRSEHGGLHSKRGLNDGFWV 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2749 773 CDD STKc_IRAK 377 645 - -
Alju03g2749 773 ProSiteProfiles Protein kinase domain profile. 371 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2749 773 FunFam receptor-like serine/threonine-protein kinase ALE2 344 446 - -
Alju03g2749 773 ProSitePatterns Serine/Threonine protein kinases active-site signature. 492 504 IPR008271 GO:0004672|GO:0006468
Alju03g2749 773 SUPERFAMILY Protein kinase-like (PK-like) 355 643 IPR011009 -
Alju03g2749 773 Gene3D Phosphorylase Kinase; domain 1 342 446 - -
Alju03g2749 773 PANTHER OS01G0750732 PROTEIN 112 667 - -
Alju03g2749 773 MobiDBLite consensus disorder prediction 75 115 - -
Alju03g2749 773 MobiDBLite consensus disorder prediction 92 106 - -
Alju03g2749 773 FunFam Receptor-like serine/threonine-protein kinase ALE2 447 664 - -
Alju03g2749 773 Gene3D Transferase(Phosphotransferase) domain 1 447 668 - -
Alju03g2749 773 Pfam Protein tyrosine and serine/threonine kinase 373 642 IPR001245 GO:0004672|GO:0006468
Alju03g2749 773 ProSitePatterns Protein kinases ATP-binding region signature. 377 399 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2749 Alju-ChrAlju03 53329833 53335874 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2749 122 759 Receptor kinase-like Gene Family AT5G56890 53.614 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Alju03g2749 PK_Tyr_Ser-Thr 3.4e-48 CL0016