Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2734 ATGGAAGAAGGTGAGAGCTGTTCGGCAAGGAGGGAGTTAACGGCACTGGTGGTAGACGATCAAGAAGTGTTGAGGAGGATCCATGGGAGGCTGTTGAAGGATGTGGGAGTGAGCCACGTGGAGACTGCTGGAAATGGGAAAGAAGCCATCGACATTCACAGAGGAGGCCAAAGTTTTGACCTAATTCTCATGGACCTCGACATGCCAGTCATGAATGGCATCCAGGCGACGAGGGAACTGAGAGCAATGGGAGTGAGAAGCAAGATCGCAGGCGTGTCAGCAAGAAACGAAGGAGAAGGAGTTAAAGAGTTCAAAGAAGCAGGTCTTGATCTCTTGTTTCCCAAACCCTTGACCACTCTTCACCTCTCTTCTCTTGTCACCCAGATCAATCCTCTTTGA 399 0.5013 MEEGESCSARRELTALVVDDQEVLRRIHGRLLKDVGVSHVETAGNGKEAIDIHRGGQSFDLILMDLDMPVMNGIQATRELRAMGVRSKIAGVSARNEGEGVKEFKEAGLDLLFPKPLTTLHLSSLVTQINPL 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2734 132 SMART REC_2 13 126 IPR001789 GO:0000160
Alju03g2734 132 SUPERFAMILY CheY-like 12 129 IPR011006 -
Alju03g2734 132 CDD REC_hyHK_CKI1_RcsC-like 16 118 - -
Alju03g2734 132 Gene3D - 2 131 - -
Alju03g2734 132 Pfam Response regulator receiver domain 16 123 IPR001789 GO:0000160
Alju03g2734 132 ProSiteProfiles Response regulatory domain profile. 14 130 IPR001789 GO:0000160
Alju03g2734 132 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2734 Alju-ChrAlju03 53203236 53203733 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2734 2 129 Response Regulator Gene Family AT3G04280 41.667 2.48e-24 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju03g2734 Response_reg 1.2e-20 CL0304