Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2718 ATGGGAGACAGTGCAATTTGCGTCGAATTACCAGCAGATGGAACAGATGAAAACGGTGAGATATCAAGAACGGACCTGAAGAGGGACTACCAATGTCTTACTGATACTGAACTTGACTCCTCCCCGACCAAGAAACAAGCAAAAGAAGTCTCAAACGATGACGTGCGCTCTGAGGTTTCCAATCCCAATATTTGTTCGAAAGAGAATATATTAGCATTTCAAGATATTAGTAGCCAGCCGAGCGAGTTGGCAAATACTAATCAAGCAGAGTGTGGAGAAGTAACGTCTACTTGTTTGGAGAATTCAAGTTCGGATGAGACCTTGAGTGATGGCGGTGGTGATCATAATACTATTTCTCAGAACGATAAGGGCGTGAGCAGTGCTGAAACGACGTCCTGTGTTGTACTGGAAATTCCCGAGCACGCTAGTTCATCTGGAATCAGAAAGATTACTTTTAAATTCAGTAAAAAGAAGGAGGACTATGATTATCAGTCCCTTGCTAGCACTAATAGGAAACCTTACGAAGAAGAGCCAAGTTCTGATTATAAGTCGGGGATGTTAGAAAGCTCGTGTGGGATGGAATATGCTCGAGCTGGTGATTGTAACTTGTACGCTCGAAATATGGAGTTGAAAATGTCAAAGAAGGTAGTTCCTAGCTGTTATCCTACAAATGTTAAAAAGCTGCTCGCAACTGGTATTCTTGATGGAGCTCGAGTGAAGTACATTTATACTCATAGCGCAGGAAAGATTGAGCTGCCTGGGATTATACAGGATGGTGGATATATGTGTGGCTGCTTGTTGTGCAGCTTCTCCAGAGTCCTAAGTGCGTTTGAGTTTGAGCAGCATGCTGGTGCCAAGACTAGGCATCCAAATAATCACATATTCCTGGAAAACGGAAAACCAATTTATAGCATTATACAGGAAATGAAAACTGCTCCACTCAGCTTATTAGATGAGGTTATAAAGAACGTTGCTGGTTCATCTGTCAATGAAGAGTCGTTCCATGTTTGGAAAGCAAGTCTTTTGCAAAGCAACGGGCAGGTTGAGGCAGAAAAGAATTTTAATTCCAGGCTTGTTGGCATGCCTCATAAAACAATAAGTGAATTTGTAGATGGTATGAGCTACATGTCCTGTTCAGATGTGCTGAGTCCTGTTGATCAGCAAAGTCATGTGAAGCAGACCACTGACGAGAGGAAACATGTGGTGAAAAAATCAAGCTCCCATACTTCTAACACAGGTCTACAGCAAAAGAAGACTGCAGATGGTTGCAACAAGAGAAGGGATAATGATTTGCATAGGCTACTTTTTATGCCAAATGGACTACCAGATGGTGCTGAATTGGCTTACTATGTCAAAGGACAGAAACTGCTTGGAGGTTACAAACAGGGAAATGGCATAGTTTGTGGTTGTTGTGATAGAGAGATAAGCCCTTCACAGTTTGAAGCTCATGCTGGAATGGCTGCCCGGCGTCAACCTTATCGCCATATATATACTTCCAACGGATTAACACTTCATGATATAGCCCTCTCACTAGCAAATGGTCAAAACCTTACCACGGGAGATAGTGATGATATGTGTGCAGTATGTGGAGATGGAGGCGATTTGATTCTTTGCAATGGATGCCCTAGGGCTTTTCATGCAGTTTGCTTAGGTTTACAGTGTGCCCCTGAAAGCTGTTGGCTATGTCAAACTTGTAGAGATATTTCTGGCTGCAGCAGATTATCTTCTACAGCAAGGCCAATAAAGATAAGGTTGACCCGGGTTGTTAAAGCGCCTGAATTTGAAATGGGTGGTTGTGTTGTTTGCAGGGAGCACGATTTTAGTGTCGCTAAATTTGACGAACGAACAGTTATAATTTGTGACCAGTGCGAGAAGGAGTATCATGTCGGGTGCTTACGGGACATTGGGCTATGTGAGTTGGAAGAATTGCCTAAGGACAAGTGGTTTTGTTGTGACGACTGCAATCGAATATATGTAGCCCTACAAAATTCAGTTTCTGCTGGAGCAGAGATTATACCAGCTTCCTTGTCAGTCCTAATGAATAGAAAGCGTGAGGAGAGGGGCTTACCTATTGATGGAGGAGTCATTGATGATATCCAATGGCGAATTCTAAGCGGAAAAAGTCGTTATCCAGAACATTTACCATTACTTTCACGGGCTGCTGCAATCTTTCGAGAGTGTTTTGATCCCATTGTTGCAGTCTCTGGTCGTGACCTGATTCCTGTTATGGTCTATGGGAGAAATATTTCTGGCCAAGAGTTTGGGGGGATGTATTGTGTTGTTTTGATGGTGAAATCTGTTGTTGTATCTGCTGGACTACTTAGGATTTTTGGACGTCATGTTGCCGAGCTTCCAATGGTTGCTACGAGTAGAGAACATCAAGGAAAAGGTTATTTTCAAGTGTTATTCTCTTGTATAGAGAAGTTGCTGTTGTCCCTGAAGGTGGAAAAACTTGTCCTTCCTGCAGCCGAGGATGCTGAATCAATTTGGACTAGAAAATTAGGCTTCCGAAAGCTGACTGAAGAACAGTTATCCAAATATGTCAGAGAGGTGCAGCTCACCCTCTTTAAGAAGACTTCGATGCTGGAGAAGACAGTGCAGCAGGCAGTGGAATGA 2616 0.4297 MGDSAICVELPADGTDENGEISRTDLKRDYQCLTDTELDSSPTKKQAKEVSNDDVRSEVSNPNICSKENILAFQDISSQPSELANTNQAECGEVTSTCLENSSSDETLSDGGGDHNTISQNDKGVSSAETTSCVVLEIPEHASSSGIRKITFKFSKKKEDYDYQSLASTNRKPYEEEPSSDYKSGMLESSCGMEYARAGDCNLYARNMELKMSKKVVPSCYPTNVKKLLATGILDGARVKYIYTHSAGKIELPGIIQDGGYMCGCLLCSFSRVLSAFEFEQHAGAKTRHPNNHIFLENGKPIYSIIQEMKTAPLSLLDEVIKNVAGSSVNEESFHVWKASLLQSNGQVEAEKNFNSRLVGMPHKTISEFVDGMSYMSCSDVLSPVDQQSHVKQTTDERKHVVKKSSSHTSNTGLQQKKTADGCNKRRDNDLHRLLFMPNGLPDGAELAYYVKGQKLLGGYKQGNGIVCGCCDREISPSQFEAHAGMAARRQPYRHIYTSNGLTLHDIALSLANGQNLTTGDSDDMCAVCGDGGDLILCNGCPRAFHAVCLGLQCAPESCWLCQTCRDISGCSRLSSTARPIKIRLTRVVKAPEFEMGGCVVCREHDFSVAKFDERTVIICDQCEKEYHVGCLRDIGLCELEELPKDKWFCCDDCNRIYVALQNSVSAGAEIIPASLSVLMNRKREERGLPIDGGVIDDIQWRILSGKSRYPEHLPLLSRAAAIFRECFDPIVAVSGRDLIPVMVYGRNISGQEFGGMYCVVLMVKSVVVSAGLLRIFGRHVAELPMVATSREHQGKGYFQVLFSCIEKLLLSLKVEKLVLPAAEDAESIWTRKLGFRKLTEEQLSKYVREVQLTLFKKTSMLEKTVQQAVE 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2718 871 ProSitePatterns Zinc finger PHD-type signature. 526 565 IPR019786 -
Alju03g2718 871 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 595 657 IPR013083 -
Alju03g2718 871 Pfam Tify domain binding domain 254 309 IPR032308 -
Alju03g2718 871 Pfam Tify domain binding domain 459 508 IPR032308 -
Alju03g2718 871 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 750 843 IPR016181 -
Alju03g2718 871 MobiDBLite consensus disorder prediction 41 55 - -
Alju03g2718 871 MobiDBLite consensus disorder prediction 16 34 - -
Alju03g2718 871 MobiDBLite consensus disorder prediction 1 61 - -
Alju03g2718 871 ProSitePatterns Zinc finger PHD-type signature. 599 654 IPR019786 -
Alju03g2718 871 SMART PHD_3 525 566 IPR001965 -
Alju03g2718 871 SMART PHD_3 598 655 IPR001965 -
Alju03g2718 871 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 513 592 IPR013083 -
Alju03g2718 871 MobiDBLite consensus disorder prediction 391 424 - -
Alju03g2718 871 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein 513 591 - -
Alju03g2718 871 SUPERFAMILY FYVE/PHD zinc finger 597 652 IPR011011 -
Alju03g2718 871 MobiDBLite consensus disorder prediction 100 124 - -
Alju03g2718 871 SUPERFAMILY FYVE/PHD zinc finger 511 566 IPR011011 -
Alju03g2718 871 Gene3D - 746 854 - -
Alju03g2718 871 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 708 860 IPR000182 GO:0016747
Alju03g2718 871 FunFam PHD zinc finger protein 597 657 - -
Alju03g2718 871 PANTHER AUTOIMMUNE REGULATOR 21 865 - -
Alju03g2718 871 ProSiteProfiles Zinc finger PHD-type profile. 523 568 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2718 Alju-ChrAlju03 53070668 53078156 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2718 1 871 PHD Transcription Factor Family AT3G53680 53.708 0.0 903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g2718 03 53070668 53078156 Alju03g2718 03 53070668 53078156 ECH