Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2689 ATGGAGCTCCCTTTCTTTAAAAAACACTCTCAGCTGGAGCTCCTCCACCTGCCACATCCACACATCTCCGGTCCCACCCTCGGCGAGCTCCTCAAACGCGTCGATGATGCTCAAAACGACACTCCTCCCCACCGTATCGTCCACCTCCCTCCCCGTCCTTCATCATACCCGTTTATTCTTTCATTCACCAATTTAACTTACAGTGTCCAAGTCCGCCGCAAGACGACCCACCCTCAAGACCACTTCGCTTCGGAACATAGCAATGCCGGTAAGCGCACCAAGACTCTACTTAATAATATCTCCGGTGAGGCCAGAGACGGTCAAATCATGGGAGTACTCGGTGCCAGTGGCTCCGGCAAATCTACCCTGATCGATGCCCTCGCCGATCGTATCTCTAAGGACAGCTTAAGAGGCTCCGTCACCTTGAACGGCGAGGCTTTGGAATCCAGACTCCTCAAAGTCATTTCCGCTTACGTCATGCAAGATGACCTTCTCTTCCCCATGCTCACCGTGGAAGAGACTCTCATGTTCTCCGCCGAGTTTCGCCTCCCTCGCTCCCTCTCTGCCTCCAAGAAGAAGGCCCGAGTCCAAGCACTCATTGACCAGCTTGGCCTCCGGAACGCCGCCAAAACAGTCATCGGCGATGAGGGCCACCGCGGCATCTCCGGCGGTGAAAGGCGTCGAGTCTCTATCGGAATCGATATTATCCACGATCCGATCCTTCTGTTCCTTGACGAACCTACTTCCGGATTGGATTCCACCAGCGCTTTCATGGTTGTTAAAGTCTTGCAGCGAATCGCTCAGAGGGGAAGCGTCGTGATCATGTCCATACACCAACCAAGCTATAGAATCCTCGGCTTATTAGATCGTTTGATTTTTCTCTCTCGCGGCCAAACCGTGTATACCGGATCTCCCACCAATCTCTCGCGCTTCTTCTCGGAGTTCGGTCACCCGATACCCGACAAGGAGAACCGGACCGAGTTCGCACTGGACCTTATTCGTGAGCTCGAAGAATCACCAAGTGGGACCCAGAGCTTAGTGGAGTTCAACAAATCGTGGCAGTTAAACGCCGCGAAAAATAAACCAGCCACCAACCGATTCTTCACCGGAACACTCAAGGAAGCCATTGCGGCCAGCATTTCCAGAGGTAAATTAGTGTGCGGTGCACCGCATCATTCCAACGTCCCAACGTCGTCGTTTCCGACATATGCTAATCCATTTTGGATGGAGATGATGGTGATAGCGAAAAGATCGCTCACCAATTCCAGAAGAATGCCAGAACTATTCGGAATCCGACTCGGTGCGGTTCTTGTAACCGGAGGGATCTTAGCCACCATCTTCTGGCATCTGGACAATACTCCTAAAGGCGTTCAAGAGCGCCTCGGTTTTTTCGCCTTCGCTATGTCCACCACCTTCTACACCTGCGCCGAGGCCTTCCCTGTTTTTCTCCAAGAGCGTTACATCTTCATGAGAGAAACTGCTTACAATGCTTACCGGCGTTGGTCCTACGTGCTAGCTCATTCCATCATCTCAATCCCTTCCTTAGCCATCCTCTCTTTAGCATTCGCCGCCACCACATTCTGGTCGGTGGGTCTGGCCGGCGGGAGCTCCGGCTTCCTGTTCTACTTCCTGGTAATGTTCGCTTCCTTCTGGGCGGGAAGCTCCTTCGTGACGTTCCTATCGGGGATAGTGTCGCACGTGATGTTGGGATTTACAGTGGTGGTAGCCATTATGGCATACTTCCTTCTGTTCAGCGGATTCTTCATAAGCAGAAACAGGATGCCACTGTACTGGATATGGTTTCATTACATGTCGCTGGTGAAGTATCCGTACGAGGGGGTGTTGCAGAACGAGTTCGGGATGGAACCGCCGAGGTGTTTTGTGAGGGGGACGCAGATGTTTGACAACACGCCGTTGGGGGAGGTGACGACGTCGTTGAAGGTGGAGTTGCTGAAGAGTATGAGCAAGACGTTGGGGATGAGCATCAACAGCGAGACGTGCGTGACCACGGGAACTGATATACTGAGGCAGCAGGGGATCACGCAGCTGGACAAGTGGAGCTGCTTTTGGGTAACGGTTGCTTGGGGATTTTTCTTTAGGTTTTTGTTCTACTTGACATTGGTGTTTGGAAGCAAGAACAAGAGGAATCGCAACTGTTGTAGCCGGGCTGAATATTTTCTGCAAGAATGCCTCGCTATGATGATAAATATGGCAACACTCGCCTCTACGTGGGCCGTTTGTCTTCAAAGACACGTACGCGTGATCTCGAGCGACTCTTTAGCCGATATGGAAGGTTTCTGGGGGGCGAAAGTTCGAGATGTGGATATGAAGCATGATTTTGCCTTTGTTGAGTTTAGCGATTACCGAGATGCTGATGATGCAAGATATAACCTAGATGGCCGTGATCTTGATGGCAGTCGAATTATTGTGGAGTTTGCAAAAGGGGTGCCTCGTGGTTCCCGAGAATATTTAGGTAGAGGTCCTCCTCCTGGTTCTGGACGCTGTTTTAATTGTGGCCTTGATGGACATTGGGCTCGTGATTGCAAAGCTGGAGACTGGAAGAACAAGTGTTACCGTTGTGGAGAGAGAGGCCATATAGAACGGAACTGTAAGAATAGTCCGAAGAAGCTGAGACGGGGGCGAAGTTACTCACGCTCACCTGTTAGGTCACCTTCTCCCCACCGTGGCAGAAGCCGTGATCGAAGTTATAGCCGAGACCGAAGCTACAGCCGATCAAGGTCCCCTGTCAGAAGAGAACGGAGCCCAGTTCATGAAGACAGGTCATTGAGTCCTCGATACAGAAGCCCAGAACCGAAAGACAGTCCTCCACCCTCAAAGACAAGGAATAGGAGTCTGACACCTGATGAGGGCAGTCCAGAGAGGAGAGGTGAGGCTTCTCCTGATAATGGCAGGCGGCAAGATGGATCTGACTACAGTCCTAGAGAAAAGAGCAGAAGCCCTGCTAGTAGCCCTGCAAGGGACGGCTATGTTAGCCCTAAAGCTAATGGTCGCAGCCGGAGCGCCAGCCCTAAGGATGACCGAAGCCCCATCGAAGAAGATGATGATACCCGCCATTCACCCAGAGGCAGTGAGTCACCTTGA 3102 0.5197 MELPFFKKHSQLELLHLPHPHISGPTLGELLKRVDDAQNDTPPHRIVHLPPRPSSYPFILSFTNLTYSVQVRRKTTHPQDHFASEHSNAGKRTKTLLNNISGEARDGQIMGVLGASGSGKSTLIDALADRISKDSLRGSVTLNGEALESRLLKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSASKKKARVQALIDQLGLRNAAKTVIGDEGHRGISGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFMVVKVLQRIAQRGSVVIMSIHQPSYRILGLLDRLIFLSRGQTVYTGSPTNLSRFFSEFGHPIPDKENRTEFALDLIRELEESPSGTQSLVEFNKSWQLNAAKNKPATNRFFTGTLKEAIAASISRGKLVCGAPHHSNVPTSSFPTYANPFWMEMMVIAKRSLTNSRRMPELFGIRLGAVLVTGGILATIFWHLDNTPKGVQERLGFFAFAMSTTFYTCAEAFPVFLQERYIFMRETAYNAYRRWSYVLAHSIISIPSLAILSLAFAATTFWSVGLAGGSSGFLFYFLVMFASFWAGSSFVTFLSGIVSHVMLGFTVVVAIMAYFLLFSGFFISRNRMPLYWIWFHYMSLVKYPYEGVLQNEFGMEPPRCFVRGTQMFDNTPLGEVTTSLKVELLKSMSKTLGMSINSETCVTTGTDILRQQGITQLDKWSCFWVTVAWGFFFRFLFYLTLVFGSKNKRNRNCCSRAEYFLQECLAMMINMATLASTWAVCLQRHVRVISSDSLADMEGFWGAKVRDVDMKHDFAFVEFSDYRDADDARYNLDGRDLDGSRIIVEFAKGVPRGSREYLGRGPPPGSGRCFNCGLDGHWARDCKAGDWKNKCYRCGERGHIERNCKNSPKKLRRGRSYSRSPVRSPSPHRGRSRDRSYSRDRSYSRSRSPVRRERSPVHEDRSLSPRYRSPEPKDSPPPSKTRNRSLTPDEGSPERRGEASPDNGRRQDGSDYSPREKSRSPASSPARDGYVSPKANGRSRSASPKDDRSPIEEDDDTRHSPRGSESP 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2689 1033 Gene3D - 85 314 IPR027417 -
Alju03g2689 1033 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 313 IPR027417 -
Alju03g2689 1033 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 76 321 IPR003439 GO:0005524
Alju03g2689 1033 SMART c2hcfinal6 856 872 IPR001878 GO:0003676|GO:0008270
Alju03g2689 1033 SMART c2hcfinal6 834 850 IPR001878 GO:0003676|GO:0008270
Alju03g2689 1033 Pfam ABC-2 type transporter 411 619 IPR013525 GO:0016020|GO:0140359
Alju03g2689 1033 MobiDBLite consensus disorder prediction 1006 1033 - -
Alju03g2689 1033 Pfam ABC-2 type transporter 278 365 IPR043926 GO:0140359
Alju03g2689 1033 CDD ABCG_EPDR 60 303 - -
Alju03g2689 1033 ProSitePatterns ABC transporters family signature. 221 235 IPR017871 GO:0005524|GO:0016887
Alju03g2689 1033 ProSiteProfiles Zinc finger CCHC-type profile. 856 872 IPR001878 GO:0003676|GO:0008270
Alju03g2689 1033 SUPERFAMILY Retrovirus zinc finger-like domains 825 873 IPR036875 GO:0003676|GO:0008270
Alju03g2689 1033 Gene3D - 753 823 IPR012677 -
Alju03g2689 1033 MobiDBLite consensus disorder prediction 953 981 - -
Alju03g2689 1033 MobiDBLite consensus disorder prediction 868 1033 - -
Alju03g2689 1033 FunFam serine/arginine-rich splicing factor RS2Z32-like isoform X1 825 853 - -
Alju03g2689 1033 SMART AAA_5 106 298 IPR003593 GO:0016887
Alju03g2689 1033 MobiDBLite consensus disorder prediction 893 944 - -
Alju03g2689 1033 Gene3D - 825 852 - -
Alju03g2689 1033 Gene3D - 853 885 - -
Alju03g2689 1033 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 733 815 IPR000504 GO:0003723
Alju03g2689 1033 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 45 704 - -
Alju03g2689 1033 ProSiteProfiles Zinc finger CCHC-type profile. 834 849 IPR001878 GO:0003676|GO:0008270
Alju03g2689 1033 SUPERFAMILY RNA-binding domain, RBD 770 834 IPR035979 GO:0003676
Alju03g2689 1033 Pfam Zinc knuckle 834 849 IPR001878 GO:0003676|GO:0008270
Alju03g2689 1033 Pfam Zinc knuckle 855 872 IPR001878 GO:0003676|GO:0008270
Alju03g2689 1033 FunFam ABC transporter G family member 6 86 312 - -
Alju03g2689 1033 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 771 808 IPR000504 GO:0003723
Alju03g2689 1033 Pfam ABC transporter 97 249 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2689 Alju-ChrAlju03 52860084 52866313 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2689 96 298 Calmodulin-binding Proteins AT2G36910 28.636 1.29e-11 67.0