Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Alju03g2689 | ATGGAGCTCCCTTTCTTTAAAAAACACTCTCAGCTGGAGCTCCTCCACCTGCCACATCCACACATCTCCGGTCCCACCCTCGGCGAGCTCCTCAAACGCGTCGATGATGCTCAAAACGACACTCCTCCCCACCGTATCGTCCACCTCCCTCCCCGTCCTTCATCATACCCGTTTATTCTTTCATTCACCAATTTAACTTACAGTGTCCAAGTCCGCCGCAAGACGACCCACCCTCAAGACCACTTCGCTTCGGAACATAGCAATGCCGGTAAGCGCACCAAGACTCTACTTAATAATATCTCCGGTGAGGCCAGAGACGGTCAAATCATGGGAGTACTCGGTGCCAGTGGCTCCGGCAAATCTACCCTGATCGATGCCCTCGCCGATCGTATCTCTAAGGACAGCTTAAGAGGCTCCGTCACCTTGAACGGCGAGGCTTTGGAATCCAGACTCCTCAAAGTCATTTCCGCTTACGTCATGCAAGATGACCTTCTCTTCCCCATGCTCACCGTGGAAGAGACTCTCATGTTCTCCGCCGAGTTTCGCCTCCCTCGCTCCCTCTCTGCCTCCAAGAAGAAGGCCCGAGTCCAAGCACTCATTGACCAGCTTGGCCTCCGGAACGCCGCCAAAACAGTCATCGGCGATGAGGGCCACCGCGGCATCTCCGGCGGTGAAAGGCGTCGAGTCTCTATCGGAATCGATATTATCCACGATCCGATCCTTCTGTTCCTTGACGAACCTACTTCCGGATTGGATTCCACCAGCGCTTTCATGGTTGTTAAAGTCTTGCAGCGAATCGCTCAGAGGGGAAGCGTCGTGATCATGTCCATACACCAACCAAGCTATAGAATCCTCGGCTTATTAGATCGTTTGATTTTTCTCTCTCGCGGCCAAACCGTGTATACCGGATCTCCCACCAATCTCTCGCGCTTCTTCTCGGAGTTCGGTCACCCGATACCCGACAAGGAGAACCGGACCGAGTTCGCACTGGACCTTATTCGTGAGCTCGAAGAATCACCAAGTGGGACCCAGAGCTTAGTGGAGTTCAACAAATCGTGGCAGTTAAACGCCGCGAAAAATAAACCAGCCACCAACCGATTCTTCACCGGAACACTCAAGGAAGCCATTGCGGCCAGCATTTCCAGAGGTAAATTAGTGTGCGGTGCACCGCATCATTCCAACGTCCCAACGTCGTCGTTTCCGACATATGCTAATCCATTTTGGATGGAGATGATGGTGATAGCGAAAAGATCGCTCACCAATTCCAGAAGAATGCCAGAACTATTCGGAATCCGACTCGGTGCGGTTCTTGTAACCGGAGGGATCTTAGCCACCATCTTCTGGCATCTGGACAATACTCCTAAAGGCGTTCAAGAGCGCCTCGGTTTTTTCGCCTTCGCTATGTCCACCACCTTCTACACCTGCGCCGAGGCCTTCCCTGTTTTTCTCCAAGAGCGTTACATCTTCATGAGAGAAACTGCTTACAATGCTTACCGGCGTTGGTCCTACGTGCTAGCTCATTCCATCATCTCAATCCCTTCCTTAGCCATCCTCTCTTTAGCATTCGCCGCCACCACATTCTGGTCGGTGGGTCTGGCCGGCGGGAGCTCCGGCTTCCTGTTCTACTTCCTGGTAATGTTCGCTTCCTTCTGGGCGGGAAGCTCCTTCGTGACGTTCCTATCGGGGATAGTGTCGCACGTGATGTTGGGATTTACAGTGGTGGTAGCCATTATGGCATACTTCCTTCTGTTCAGCGGATTCTTCATAAGCAGAAACAGGATGCCACTGTACTGGATATGGTTTCATTACATGTCGCTGGTGAAGTATCCGTACGAGGGGGTGTTGCAGAACGAGTTCGGGATGGAACCGCCGAGGTGTTTTGTGAGGGGGACGCAGATGTTTGACAACACGCCGTTGGGGGAGGTGACGACGTCGTTGAAGGTGGAGTTGCTGAAGAGTATGAGCAAGACGTTGGGGATGAGCATCAACAGCGAGACGTGCGTGACCACGGGAACTGATATACTGAGGCAGCAGGGGATCACGCAGCTGGACAAGTGGAGCTGCTTTTGGGTAACGGTTGCTTGGGGATTTTTCTTTAGGTTTTTGTTCTACTTGACATTGGTGTTTGGAAGCAAGAACAAGAGGAATCGCAACTGTTGTAGCCGGGCTGAATATTTTCTGCAAGAATGCCTCGCTATGATGATAAATATGGCAACACTCGCCTCTACGTGGGCCGTTTGTCTTCAAAGACACGTACGCGTGATCTCGAGCGACTCTTTAGCCGATATGGAAGGTTTCTGGGGGGCGAAAGTTCGAGATGTGGATATGAAGCATGATTTTGCCTTTGTTGAGTTTAGCGATTACCGAGATGCTGATGATGCAAGATATAACCTAGATGGCCGTGATCTTGATGGCAGTCGAATTATTGTGGAGTTTGCAAAAGGGGTGCCTCGTGGTTCCCGAGAATATTTAGGTAGAGGTCCTCCTCCTGGTTCTGGACGCTGTTTTAATTGTGGCCTTGATGGACATTGGGCTCGTGATTGCAAAGCTGGAGACTGGAAGAACAAGTGTTACCGTTGTGGAGAGAGAGGCCATATAGAACGGAACTGTAAGAATAGTCCGAAGAAGCTGAGACGGGGGCGAAGTTACTCACGCTCACCTGTTAGGTCACCTTCTCCCCACCGTGGCAGAAGCCGTGATCGAAGTTATAGCCGAGACCGAAGCTACAGCCGATCAAGGTCCCCTGTCAGAAGAGAACGGAGCCCAGTTCATGAAGACAGGTCATTGAGTCCTCGATACAGAAGCCCAGAACCGAAAGACAGTCCTCCACCCTCAAAGACAAGGAATAGGAGTCTGACACCTGATGAGGGCAGTCCAGAGAGGAGAGGTGAGGCTTCTCCTGATAATGGCAGGCGGCAAGATGGATCTGACTACAGTCCTAGAGAAAAGAGCAGAAGCCCTGCTAGTAGCCCTGCAAGGGACGGCTATGTTAGCCCTAAAGCTAATGGTCGCAGCCGGAGCGCCAGCCCTAAGGATGACCGAAGCCCCATCGAAGAAGATGATGATACCCGCCATTCACCCAGAGGCAGTGAGTCACCTTGA | 3102 | 0.5197 | MELPFFKKHSQLELLHLPHPHISGPTLGELLKRVDDAQNDTPPHRIVHLPPRPSSYPFILSFTNLTYSVQVRRKTTHPQDHFASEHSNAGKRTKTLLNNISGEARDGQIMGVLGASGSGKSTLIDALADRISKDSLRGSVTLNGEALESRLLKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSASKKKARVQALIDQLGLRNAAKTVIGDEGHRGISGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFMVVKVLQRIAQRGSVVIMSIHQPSYRILGLLDRLIFLSRGQTVYTGSPTNLSRFFSEFGHPIPDKENRTEFALDLIRELEESPSGTQSLVEFNKSWQLNAAKNKPATNRFFTGTLKEAIAASISRGKLVCGAPHHSNVPTSSFPTYANPFWMEMMVIAKRSLTNSRRMPELFGIRLGAVLVTGGILATIFWHLDNTPKGVQERLGFFAFAMSTTFYTCAEAFPVFLQERYIFMRETAYNAYRRWSYVLAHSIISIPSLAILSLAFAATTFWSVGLAGGSSGFLFYFLVMFASFWAGSSFVTFLSGIVSHVMLGFTVVVAIMAYFLLFSGFFISRNRMPLYWIWFHYMSLVKYPYEGVLQNEFGMEPPRCFVRGTQMFDNTPLGEVTTSLKVELLKSMSKTLGMSINSETCVTTGTDILRQQGITQLDKWSCFWVTVAWGFFFRFLFYLTLVFGSKNKRNRNCCSRAEYFLQECLAMMINMATLASTWAVCLQRHVRVISSDSLADMEGFWGAKVRDVDMKHDFAFVEFSDYRDADDARYNLDGRDLDGSRIIVEFAKGVPRGSREYLGRGPPPGSGRCFNCGLDGHWARDCKAGDWKNKCYRCGERGHIERNCKNSPKKLRRGRSYSRSPVRSPSPHRGRSRDRSYSRDRSYSRSRSPVRRERSPVHEDRSLSPRYRSPEPKDSPPPSKTRNRSLTPDEGSPERRGEASPDNGRRQDGSDYSPREKSRSPASSPARDGYVSPKANGRSRSASPKDDRSPIEEDDDTRHSPRGSESP | 1033 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Alju03g2689 | 1033 | Gene3D | - | 85 | 314 | IPR027417 | - | |
Alju03g2689 | 1033 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 93 | 313 | IPR027417 | - | |
Alju03g2689 | 1033 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 76 | 321 | IPR003439 | GO:0005524 | |
Alju03g2689 | 1033 | SMART | c2hcfinal6 | 856 | 872 | IPR001878 | GO:0003676|GO:0008270 | |
Alju03g2689 | 1033 | SMART | c2hcfinal6 | 834 | 850 | IPR001878 | GO:0003676|GO:0008270 | |
Alju03g2689 | 1033 | Pfam | ABC-2 type transporter | 411 | 619 | IPR013525 | GO:0016020|GO:0140359 | |
Alju03g2689 | 1033 | MobiDBLite | consensus disorder prediction | 1006 | 1033 | - | - | |
Alju03g2689 | 1033 | Pfam | ABC-2 type transporter | 278 | 365 | IPR043926 | GO:0140359 | |
Alju03g2689 | 1033 | CDD | ABCG_EPDR | 60 | 303 | - | - | |
Alju03g2689 | 1033 | ProSitePatterns | ABC transporters family signature. | 221 | 235 | IPR017871 | GO:0005524|GO:0016887 | |
Alju03g2689 | 1033 | ProSiteProfiles | Zinc finger CCHC-type profile. | 856 | 872 | IPR001878 | GO:0003676|GO:0008270 | |
Alju03g2689 | 1033 | SUPERFAMILY | Retrovirus zinc finger-like domains | 825 | 873 | IPR036875 | GO:0003676|GO:0008270 | |
Alju03g2689 | 1033 | Gene3D | - | 753 | 823 | IPR012677 | - | |
Alju03g2689 | 1033 | MobiDBLite | consensus disorder prediction | 953 | 981 | - | - | |
Alju03g2689 | 1033 | MobiDBLite | consensus disorder prediction | 868 | 1033 | - | - | |
Alju03g2689 | 1033 | FunFam | serine/arginine-rich splicing factor RS2Z32-like isoform X1 | 825 | 853 | - | - | |
Alju03g2689 | 1033 | SMART | AAA_5 | 106 | 298 | IPR003593 | GO:0016887 | |
Alju03g2689 | 1033 | MobiDBLite | consensus disorder prediction | 893 | 944 | - | - | |
Alju03g2689 | 1033 | Gene3D | - | 825 | 852 | - | - | |
Alju03g2689 | 1033 | Gene3D | - | 853 | 885 | - | - | |
Alju03g2689 | 1033 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 733 | 815 | IPR000504 | GO:0003723 | |
Alju03g2689 | 1033 | PANTHER | ABC TRANSPORTER G FAMILY MEMBER 28 | 45 | 704 | - | - | |
Alju03g2689 | 1033 | ProSiteProfiles | Zinc finger CCHC-type profile. | 834 | 849 | IPR001878 | GO:0003676|GO:0008270 | |
Alju03g2689 | 1033 | SUPERFAMILY | RNA-binding domain, RBD | 770 | 834 | IPR035979 | GO:0003676 | |
Alju03g2689 | 1033 | Pfam | Zinc knuckle | 834 | 849 | IPR001878 | GO:0003676|GO:0008270 | |
Alju03g2689 | 1033 | Pfam | Zinc knuckle | 855 | 872 | IPR001878 | GO:0003676|GO:0008270 | |
Alju03g2689 | 1033 | FunFam | ABC transporter G family member 6 | 86 | 312 | - | - | |
Alju03g2689 | 1033 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 771 | 808 | IPR000504 | GO:0003723 | |
Alju03g2689 | 1033 | Pfam | ABC transporter | 97 | 249 | IPR003439 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Alju03g2689 | Alju-ChrAlju03 | 52860084 | 52866313 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Alju03g2689 | 96 | 298 | Calmodulin-binding Proteins | AT2G36910 | 28.636 | 1.29e-11 | 67.0 |