Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2684 ATGAGTCTTCTCAGAGCCGCTCTGAGATCGAACTCTACATTTTCCGCTATCCAAGATTGTCATGGCTTCCCACCTCTCCTTCGAGCCGCGTCCAGGATGTTCTTTTCATCTGAAGCACAACAGCCACCTCAGGATCCACTCGCCGATTCGTTTATGCGAGCTCCCCGTCAAGGTTTGCAATATGGTAGGCTGTCCAGCGTTCGTAATTACACCCTGAAAACAGATATAATCCACTTTCTTGAAGATTCTAATTTGACCATGGAAGATGTCAAAGTGGATTACGACCGTTACTTTACGCCCCGTGCAATGATGTTGCAATTCCATTCTCACAAAGACTATGATCAGGCTGTTAGGCATATTGCAAGGAATGGTCGCTTGTACAGATTGGAAAGGGTTGATCGTGCCCAATGGGATGTTGTTACTCCCTATGATGGAAAAACTATTTTAATGCGAGGATTTCCTCGAAATGCACTAATAGACGATGTAGAACGTTTTCTGCATGGTTATGACTATGATCAGCCCTCCATCAATATTTTTCTAAGACAGGGAGAATCTTTAGGCAATCCCATTAAAATGGCAACAGTACGTTTCCGTTCAAGGACTGAAGCGATGAATGCATTCATCACAAAAAATACAACGTTTTGCCTTAACAACCAAATTTCCATTATGGTTCTCCAGTAGTTGCAGGATTTGAAACCCACAGAGGCAGCAAAGTCAAACTCTGATTTATTGCAACGTGTGCTTGACGAATTTCAAGCTCCATCCGGTGATGAGAGCAATACCTCAGAGACTGAGAATAATATCCAATCATGGACATCCTTTTACTGGAGTTTCCTCTGTCAGGACCAGTTAGATGATGGTATTGGTGGGGATCTTTACTACCGTCAACAGTATTTTAAGAGTCTTTATGACTATATTGTGGGAAGAGATTGGCCCTCAGACTCAACTACATGGAAATTATTAAGAGAAGCACATGATCCCATAATAATGGAAGAAAGAGCCACCATCTTAGCTGCAATCTCCACCCTCCCTCCTTCCCAACTCTCCCATCTCTCTCTCTCCCTCCTCTCCGCCACCGACGACCACCGCCTCCGCCTCTCCTCCGTCCTCTCTTCCCCGTCTCTCTTCTCCTCCACCCTCCGCCACCTCCACTCTCTCTCCCTCCCCGAAAAGTACCTCCTTATTGCTCGCCACCTCCTCTCCTCCCTCCGCCGCATCACCACCCACTTCCTCCTCTCCGACCTCACCACCCCACCTCCGCCGCCCATGTCCGCCGCCGCCATTCGTGAGAGTGACCTGAACACCGTTCTCCTCCTCCTCTTTTTCTGCGAAACCCACCAACACAACCCCACAGTCCTCGAGGAGAATTATTCAGATTGGCGGGTCAGCTTATGCAATATTTTCTCTGATAAGTTGTTGACAGCTGCTTATTCTCCCGTCGGGGCGAGTCCTTGGATGGCCCTGGCTCCTTACGTTGATATGGTGAGTCGGAGCTGGAGACTTGTGAGGGCAAGTTGCGGCGGCGGGAAGAAGGGGGCGTCGCAGGAGACGGTGGTGAGACTTCCGGCGGTGGAAATGAAGGAGGGCGGAAGGGAGTGTGTGATATGTAAGGAGGAGATGAAGGTGGGGAAGGAGGCGTGTGAATTGCCATGTGAGCATTTGTTTCATTGGAGCTGTATATTGCCGTGGCTCAGCACCAATGACACGTGTCCTTGCTGTCGGCACCGATTGCCGTCCGATGATGTCTTTGGAGAGATCCAACGGCTCTGGGATGTGTTAATTAAATTGAGTGATCGACAAAGCCTGGTTTAG 1812 0.489 MSLLRAALRSNSTFSAIQDCHGFPPLLRAASRMFFSSEAQQPPQDPLADSFMRAPRQGLQYGRLSSVRNYTLKTDIIHFLEDSNLTMEDVKVDYDRYFTPRAMMLQFHSHKDYDQAVRHIARNGRLYRLERVDRAQWDVVTPYDGKTILMRGFPRNALIDDVERFLHGYDYDQPSINIFLRQGESLGNPIKMATVRFRSRTEAMNAFITKNTTFCLNNQISIMVLQXLQDLKPTEAAKSNSDLLQRVLDEFQAPSGDESNTSETENNIQSWTSFYWSFLCQDQLDDGIGGDLYYRQQYFKSLYDYIVGRDWPSDSTTWKLLREAHDPIIMEERATILAAISTLPPSQLSHLSLSLLSATDDHRLRLSSVLSSPSLFSSTLRHLHSLSLPEKYLLIARHLLSSLRRITTHFLLSDLTTPPPPPMSAAAIRESDLNTVLLLLFFCETHQHNPTVLEENYSDWRVSLCNIFSDKLLTAAYSPVGASPWMALAPYVDMVSRSWRLVRASCGGGKKGASQETVVRLPAVEMKEGGRECVICKEEMKVGKEACELPCEHLFHWSCILPWLSTNDTCPCCRHRLPSDDVFGEIQRLWDVLIKLSDRQSLV 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2684 603 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 503 580 IPR013083 -
Alju03g2684 603 Pfam Ring finger domain 532 574 IPR001841 -
Alju03g2684 603 SUPERFAMILY RNA-binding domain, RBD 141 224 IPR035979 GO:0003676
Alju03g2684 603 PANTHER EXPRESSED PROTEIN 1 226 - -
Alju03g2684 603 CDD RING-H2_PA-TM-RING 532 574 - -
Alju03g2684 603 SUPERFAMILY RING/U-box 528 579 - -
Alju03g2684 603 ProSiteProfiles Zinc finger RING-type profile. 533 574 IPR001841 -
Alju03g2684 603 SMART ring_2 533 573 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2684 Alju-ChrAlju03 52840740 52847579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2684 331 598 C3H Transcription Factor Family AT5G02750 43.158 1.76e-60 201