Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2673 ATGTCATCTCATGACTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGTGCTGTTGACTTTCTAGTGAAACCTATACGGAAGAATGAGCTTAAAAACCTGTGGCAGCATGTGTGGAGAAGATGTCATAGTTCAAGTGGCAGTGGAAGTGAAAGTGGCACACAAACTCAGAAATCTATTAAATCAAAGAGTCTTGAGAAGTCTGATAACAACAGTGGCAGCAACGATGAAGAAGACAATGGTAGTGTAGGTCTAAATAACGGGGATGGTAGTGACAATGGTAGTGGTACTCAGAGCTCGTGGACTAAACAAGCTGTAGAAGTTGACAGTCCCAAACCATCACAGTGGGATCATATAGCTGAGTGCCCTGATAGCACCTGCGCTCAAGTTGTTCTCTCAAATGCCGAAATTAGTGGAAACAAGATGTTTTCTGTAGCCATAAAGGAGTGTCCTGATCAGAAGGATCAGCTTGAGCTGAAAGTGGACTCGAGTAGGGATCTTGGCTTGATTCTCGACTATAGAAATGAGGTTTTAACCAATAATTTGGGGGGGAAACATAGTAACCCACTTGATATAGGCTCCTGTAAATTCAATGAGCAACTTGATAGAGGACAGCTGGAACTTCACTGTGAAGATCCTTCTAGCAAGTCAAGATGCAAAGGTCCTTTTCAGTCTGATGCTGTTACTAGCACATATGATTTGCGGATTCATGGTGGAGAATTTGAAGCCTCCAATAGAAGAGCCAAGCCCTCAGGTACTGAAAGCAAAGCTATCAATGATAATGAAGAATTGCCGTCTCTTGAGCTCAGTTTAAAGAGACTTAGAGGAGTTAAAGATGCTGGGCTTACAATTCAGGATGAGCGTAATGTTTTAAGACGTTCAGACCTTTCAGCCTTTTCAAGGTATAATGCGGCTTCTAATGCTAAGAAATCTCCTGGTGGTTGTGCTGGAAGCAATTCTCCCCATAATAGCAGCTTAGAAGTTACAAAGAAAGATTCATCACGTGACATCCAATCCCATTCTAGTGGAAATCCCCCTAACCAGAACTCAAATGGTGCCAGCAATAACATCGACATGGGCTCCACCACTGATAATGCTTTCACTAAATCTGCTGTTATGAGCAAGACAACTGTGGTGTCACCTGGTAAATGTTTGTACCAATCTTCTGCCTTCCAGCCTATAAAAAACAACTTCATGTGCACCTCTCAACAAGTTGCAGTGCATAATACTGAAGATATGACAGCCTCAACTATGCTAGAACCTCCCAGAGGAGGGACACACAAAGACTCTCCAACACAGGACTTCCACGGCATATACAGCAACAATCGTAGCTGCATTGTTAACAACATGCAGCGTCAGGTACCTCCAGACCATGATGATGCATCATCAAAGAAAGTTGCTGCCACAGCTCCACACCGTGGGTCATCAAATGTAGTTGAAGGTAATGTTGGAAATTATAGTATCAATAGAAGCGTGTCAGGCAGCAACAATGGAAGCAATGGACAAAATGGGAGCAGCACTGCAGTCAATGTTGGAGGGATAAACAGAGAAAATAACAATGGAATTGCTGGGAATAGTCGAGGTTGTGATGCTAGTGGGAGCGGGAGCGGGAGTGGGAGTGCTAACGGAATAGATCAGAAGAAGACTTCTCAAAGAGAAGCTGCCTTAACAAAATTTCGCCAGAAGAGAAAAGAGAGGTGCTTCCGGAAAAAGGTTCGATATCAAAGCAGAAAGAAATTAGCTGAACAACGACCTCGCTTTCGTGGACAATTTGTTCGACAGGCCTCCAACAAAAGTACAAGTGAGACAGAGGAAGCAACTGACAGCTGA 1830 0.4339 MSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSIKSKSLEKSDNNSGSNDEEDNGSVGLNNGDGSDNGSGTQSSWTKQAVEVDSPKPSQWDHIAECPDSTCAQVVLSNAEISGNKMFSVAIKECPDQKDQLELKVDSSRDLGLILDYRNEVLTNNLGGKHSNPLDIGSCKFNEQLDRGQLELHCEDPSSKSRCKGPFQSDAVTSTYDLRIHGGEFEASNRRAKPSGTESKAINDNEELPSLELSLKRLRGVKDAGLTIQDERNVLRRSDLSAFSRYNAASNAKKSPGGCAGSNSPHNSSLEVTKKDSSRDIQSHSSGNPPNQNSNGASNNIDMGSTTDNAFTKSAVMSKTTVVSPGKCLYQSSAFQPIKNNFMCTSQQVAVHNTEDMTASTMLEPPRGGTHKDSPTQDFHGIYSNNRSCIVNNMQRQVPPDHDDASSKKVAATAPHRGSSNVVEGNVGNYSINRSVSGSNNGSNGQNGSSTAVNVGGINRENNNGIAGNSRGCDASGSGSGSGSANGIDQKKTSQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRFRGQFVRQASNKSTSETEEATDS 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2673 609 MobiDBLite consensus disorder prediction 452 609 - -
Alju03g2673 609 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 231 595 IPR045281 GO:0009909
Alju03g2673 609 MobiDBLite consensus disorder prediction 562 577 - -
Alju03g2673 609 ProSiteProfiles Response regulatory domain profile. 1 39 IPR001789 GO:0000160
Alju03g2673 609 MobiDBLite consensus disorder prediction 75 109 - -
Alju03g2673 609 MobiDBLite consensus disorder prediction 307 362 - -
Alju03g2673 609 MobiDBLite consensus disorder prediction 475 550 - -
Alju03g2673 609 MobiDBLite consensus disorder prediction 307 327 - -
Alju03g2673 609 ProSiteProfiles CCT domain profile. 552 594 IPR010402 GO:0005515
Alju03g2673 609 MobiDBLite consensus disorder prediction 338 362 - -
Alju03g2673 609 MobiDBLite consensus disorder prediction 44 61 - -
Alju03g2673 609 Gene3D - 1 76 - -
Alju03g2673 609 Pfam CCT motif 552 594 IPR010402 GO:0005515
Alju03g2673 609 SUPERFAMILY CheY-like 1 44 IPR011006 -
Alju03g2673 609 MobiDBLite consensus disorder prediction 44 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2673 Alju-ChrAlju03 52773395 52778372 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2673 1 596 Response Regulator Gene Family AT5G02810 48.309 1.06e-119 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju03g2673 CCT 2.2e-15 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g2673 03 52773395 52778372 Alju03g2673 03 52773395 52778372 ECH