Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2668 ATGAACTCCACCACTTCGAATTCTCAATCAATGGCGACCTCGACGCCCACTGACGGGTCTAGCAAGAAGGTGAGAAAACCATATACTATAACCAAGTCGAGGGAAAGCTGGACCGAGGAAGAGCACGATAAGTTTCTAGAAGCTCTTCAACTATTTGACAGAGATTGGAAGAAAATTGAAGATTTTGTCGGTTCAAAAACGGTTATTCAGATTCGAAGCCATGCCCAGAAATACTTCTTAAAAGTTCAGAAGAATGGAACAATTGCACACGTGCCTCCTCCTCGACCTAAGCGCAAAGCTGCTCATCCATACCCGCAAAAGGCACCAAAGAATGTTTTGGTTCCACTGCCAGCATCCATGGCTTACGTTTCTTCAACAAATACTATTGCTCCTGGGTACGCCACATGGGATGAAACTTCAATACCGATTAATGCTGGGTCAAACAGATACAAACCATGTCAGGACGACATCACCACCCTTCATGGGAATGAAGCTGATATTGGATCAAAGGGGTTATCAAAAATTAGCAACAGCAGTCTCAGCGGTGTTGGAACCTCTACTAGAATGCTACAAAGTTCTGAGATGCCAAAACAAGGTCCAGTGCTTCATGGTTTACCAGACTTTGCTGAGGTTTACAGCTTTATTGGAAGTGTATTTGATCCAGATTCAAAAGGACATGTACGGAAGCTGAAGGAGATGGATCCTATAAATTTTGAAACTGTTTTGTTGTTGATGAGAAACCTCACTGTCAACTTGTGTAGCCCTGACTTTGAGCCCTTTAAGAAGGAATTGCTGCCATGA 801 0.4332 MNSTTSNSQSMATSTPTDGSSKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTIAHVPPPRPKRKAAHPYPQKAPKNVLVPLPASMAYVSSTNTIAPGYATWDETSIPINAGSNRYKPCQDDITTLHGNEADIGSKGLSKISNSSLSGVGTSTRMLQSSEMPKQGPVLHGLPDFAEVYSFIGSVFDPDSKGHVRKLKEMDPINFETVLLLMRNLTVNLCSPDFEPFKKELLP 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2668 266 SMART sant 33 81 IPR001005 -
Alju03g2668 266 ProSiteProfiles SANT domain profile. 32 85 IPR017884 -
Alju03g2668 266 CDD SANT 36 79 IPR001005 -
Alju03g2668 266 PANTHER SWI/SNF COMPLEX-RELATED 7 253 - -
Alju03g2668 266 SUPERFAMILY Homeodomain-like 28 84 IPR009057 -
Alju03g2668 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 83 IPR017930 -
Alju03g2668 266 MobiDBLite consensus disorder prediction 1 26 - -
Alju03g2668 266 Pfam Myb-like DNA-binding domain 34 79 IPR001005 -
Alju03g2668 266 MobiDBLite consensus disorder prediction 1 36 - -
Alju03g2668 266 Gene3D - 37 84 - -
Alju03g2668 266 FunFam protein REVEILLE 6 isoform X1 36 84 - -
Alju03g2668 266 NCBIfam myb-like DNA-binding domain, SHAQKYF class 32 81 IPR006447 GO:0003677
Alju03g2668 266 ProSiteProfiles Myb-like domain profile. 29 79 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2668 Alju-ChrAlju03 52734006 52738470 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju03g2668 Myb_DNA-binding 3.6e-12 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g2668 03 52734006 52738470 Alju03g2668 03 52734006 52738470 ECH