Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2667 ATGTTCCAGTGCATTTTAAAAGTAAAAAAGAACTTGAAAAGTCCAGCATACTTGGTTCCGTGGTTCACTCTTCAGATATTTCCCTCCTCTATTTGCCGGTTGAATCGCTTTCTTCACAAAGGGCACAGACCCAAAACTGCTTGGTTTCCCAGTTCTAATGGTCCTATCTACCTGATCGAATATAAACAACCCAAAGCTCTAGAGTGCCGTTTCTTCTTTATCACTTCCCGCCACCACCCCACCTCCCCGATGGCCGCAGCAGCTCGTCCCATCGTCAGTGTACAAGCCCTTGAGGGCGATATGGCCACTGATGAAACCCAGACAGTTCCACTGCCTGATGTTATGAAGGCAGCGATTCGACCCGATATCGTTACCTTTGTCCACTCCAACATCTCCAAGAACAGTCGGCAACCCTATGCCGTCAGCAAACGCGCCGGTCACCAGACTTCCGCCGAATCGTGGGGTACCGGTCGTGCAGTGTCCCGGGTGGTGGTACCCACCGCGCTGGTCAGGGAGCTTATGAAGAGATACGCTGTCGTTTCAGCCATTGCTGCCTCCGCAATTTTATCTCTCGTGATGGCCCGTGGGCACATAATTGAGTCTGTTCCTGAAATGCCTCTGGTCGTCAGTGATTCTGCTCAAGGTGTTGAGAAAACTAAGGAAGCTATCAAAGTGCTCCAGAAGATTGGTGCTTTTCCCGACTCTAAGAAGGCAAAGGACAGCCATGCAATCCGTCCTGAAAGTCTGCATGGAGTTGAGATCGTGAATGTGGAGAGATTGAACCTTCTAAAATTGGCTCCTGTTGGTCATCTTGGAAGGTTTGTTATTTGGAGTAAGTCTGCTTTTGAGAAGCTGGATTCGATTTATGGATCATTCGACATGCCATCAGAGAAGGAAGGGTACTTTCTTCCTAGAGCTAAGATGGTTAACTCTGATTTGGGAAGGATCATCAACTCTGATGAGGTTCAGTCTGTTGTGAGGCCCATCAAGAAAGAAGTCAAGCGGGCACCCCTCAAGAAGAACCCGCTCAAGATTCTCAATGCTATGTTGAAACTGAATCCATATGCTAAAACTGCTAGGATGTCACTTCTGGCTGAAGCGCAGCGTGTGAAAGCAAAGAAAGAGAAGCTTGATGAGAAGAGGAAGTCTGTCTCCAAGGAGGAGGCTTCTGCTATAAAGGCTGCTGGAAAAGCTTGGTATCAAACCATGGTGTCTGATTCTGATTACACGGAATTTGAGAACTTTTTTAAGTGGTTAAGTGTTTCCCAGTGA 1272 0.4764 MFQCILKVKKNLKSPAYLVPWFTLQIFPSSICRLNRFLHKGHRPKTAWFPSSNGPIYLIEYKQPKALECRFFFITSRHHPTSPMAAAARPIVSVQALEGDMATDETQTVPLPDVMKAAIRPDIVTFVHSNISKNSRQPYAVSKRAGHQTSAESWGTGRAVSRVVVPTALVRELMKRYAVVSAIAASAILSLVMARGHIIESVPEMPLVVSDSAQGVEKTKEAIKVLQKIGAFPDSKKAKDSHAIRPESLHGVEIVNVERLNLLKLAPVGHLGRFVIWSKSAFEKLDSIYGSFDMPSEKEGYFLPRAKMVNSDLGRIINSDEVQSVVRPIKKEVKRAPLKKNPLKILNAMLKLNPYAKTARMSLLAEAQRVKAKKEKLDEKRKSVSKEEASAIKAAGKAWYQTMVSDSDYTEFENFFKWLSVSQ 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2667 423 SUPERFAMILY Ribosomal protein L4 102 287 IPR023574 GO:0003735|GO:0005840|GO:0006412
Alju03g2667 423 Coils Coil 360 387 - -
Alju03g2667 423 PANTHER 60S RIBOSOMAL PROTEIN L4 249 416 IPR045240 -
Alju03g2667 423 Pfam Ribosomal protein L4/L1 family 174 286 IPR002136 GO:0003735|GO:0005840|GO:0006412
Alju03g2667 423 Gene3D - 249 327 IPR023574 GO:0003735|GO:0005840|GO:0006412
Alju03g2667 423 Gene3D - 170 248 IPR023574 GO:0003735|GO:0005840|GO:0006412
Alju03g2667 423 Gene3D - 84 168 IPR023574 GO:0003735|GO:0005840|GO:0006412
Alju03g2667 423 Pfam 60S ribosomal protein L4 C-terminal domain 300 371 IPR025755 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2667 Alju-ChrAlju03 52730969 52733597 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2667 85 423 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 63.614 1.54e-160 456
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g2667 03 52730969 52733597 Alju03g2667 03 52730969 52733597 ECH