Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2647 ATGTTGTCTCCGACTCATGCTGAAGCTCCCAACCACCTTGGCTACTCGACCTGGGTGTTGCCTTCCGTTGATCAGTGGCCGTCCATGTCTGAAATTTACAGGGAGGAGCTTCATTGTGCACTCTTGGTGATACACAACAGCCTGCGGATAGGCATGCTCGTAATGGGTCAGAGTATTAGCCCACAGAATCTGCCCTGTTTGCTTACCTGTGGATCTGTTCGATTCTGCGAGGCAGCCATGGAGGATGATGCTGAGTTTCCCGGCAATATTCCTCCTTCTTTCGATCGCGTGGGGAACGTGATCAAGAAGTCTGAAGCCCAAGGTTTCAACGCAGGATTAATCGTTCTCCTGCTTGTTGGTGGGTTGCTATTGACATTCCTAGTTGGAAATTATATACTTTACACGTATGCACAGAAGACCCTCCCTCCCAGAAAAAAGAAGCCTGTCTCCAAGAAAAAGATGAAAAGGGAGAGACTGAAGCAAGGTGTCTCCGCACCTGGAGAGTAG 507 0.4931 MLSPTHAEAPNHLGYSTWVLPSVDQWPSMSEIYREELHCALLVIHNSLRIGMLVMGQSISPQNLPCLLTCGSVRFCEAAMEDDAEFPGNIPPSFDRVGNVIKKSEAQGFNAGLIVLLLVGGLLLTFLVGNYILYTYAQKTLPPRKKKPVSKKKMKRERLKQGVSAPGE 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2647 168 MobiDBLite consensus disorder prediction 144 158 - -
Alju03g2647 168 MobiDBLite consensus disorder prediction 143 168 - -
Alju03g2647 168 PANTHER DNA-BINDING PROTEIN S1FA2 80 168 IPR006779 GO:0003677|GO:0005634|GO:0006355
Alju03g2647 168 Pfam DNA binding protein S1FA 104 168 IPR006779 GO:0003677|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2647 Alju-ChrAlju03 52612150 52615288 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Alju03g2647 S1FA 1.3e-38 No_clan