Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2639 ATGGAACAGGAAGGTATTGAACCCCTGCTACACATGTCAGTAGTTACTCTTCCTAGCCATGTCCTACTTTCACATCCAGATTGTCAGTTATTTGCGGGTCTATCTTTAACAACAGTGTCTATCCTGATATTGCAAGTGACAGCCATGAATCATAGGCATTTGTATAGCACGTCTCAAATATTTGAGAGTGATCATGACCAAAATTGGAATTCTATGCATACTGATCAACAGTATGTGCACCTTGGTAGAGCTAGCACTTCAGAGAATGGTTCTTTCGTTTATCCTATGGAAAATATGTCTATAGATGGCATTTCTTTTGCCTCTAATTGGAATCCTACCACAACGCCAAATGTATTTGCATCCTCAAGTCTCAATATTGAAGTACCACCTCATCAATCTGATGCATCTGGCACTTCTCATGATCATTTTCTGCATTCATCAAGTGCTGCGGCCTTCTTTACAGTTTCTGAAAATTATGCTCATCAGCCTCCTCCTCCTCCCAATTATGATAGACAGCCATTTCACGTTGTTGATGGTGGTTTTATTGATCTTACAATGGGAAGTGGAAGAGGGCCTCACAAGCGGAAGAGCCCAGGAATTCCTCCAGTCTGTGAGAGAGGTAGTACGAGCAGATACATAAATGCTGGAAGTTCAACTGATCTTCCAATGTCTTCAGAACTACAGCAGGAGAAGCCAAATATGGATTGTCAGTATTTGCCTCGGGATCAAGTTACCATGCCACTCACCTTCAGAGGTAGTGGCCTTTCAATCAGGGGTGAGGGTTCCTTGAGAAATGTGAGAAGCCGTTCTACACTTGATTTTGAATCCAACTTGGCTAGGACCCATTTATCTGGCAATCATTCACACAACTACTCCACTGGTCTACCCATTGACCATTCTAGCACAATGGATCCGTCAGGTCAGAGTTCTAGCGCATTAACACGGGATTGGAGCCAAATGAGCACATCTCATGCTCATGGCAGGGTGCTATTACCAGATACAAGTGCTCTTAATTGTGAGACAAGTCACTTCCTTGTTGGAAGTGGCACTAGTAATACCCCTGTAGATGTTGGGGGTTATCATCACGAATTTGGTACAAGCAGAAATCCAATTGTACCTCAAAGTTTTCATAATAATCTGACTCAGACTGCTAGGGGAGTGCGAAGCAACTTTTCACAAAGGTCTACTCCACCTTTTAGACCTTCTTCAAGCTTGCGCTTAGGACATGTAGCACCATCAGATGATGGATTGCAAATGGTTGCAGATAGTTACTCCTCGAGACATCCAAGGCCACTAACAACCATTGGCTGGCGGAACAGTGATAGAAATGGAAGGTCAAGGATATCTAGTGATAGATATCGACCACTGGCTGATGCATCTGGTCCCCACGACCGATTTTCTTCAGAGGGTTTCATGATTGTAGATCGTGGGTTGCCATATGGATCTAGAAGTATGGTTGATCAGCATAGGGACATGAGGATGGATATTGACAACATGAGCTATGAGGAACTACTTGCCCTTGGAGAGAGGATTGGTCATGTCAACACAGGATTGTCTGAGGACTTGATTTCAAAATGCACGACGGAAACAATATATTGTTCATCTGAGCAAAGTCAGGAGGAAGGAACTTGTGTAATCTGTTTGGAAGAATACAAGGACATGGATGATATTGGGACGCTGAAAACTTGCCGTCACGACTACCATGTGAGCTGCATTAGAAAGTGGTTATCTATGAAGAACAAATGTCCAATCTGTAAAGCTCCTTCTCTGCCAGATGATAAGAAGGATAAATAA 1794 0.4309 MEQEGIEPLLHMSVVTLPSHVLLSHPDCQLFAGLSLTTVSILILQVTAMNHRHLYSTSQIFESDHDQNWNSMHTDQQYVHLGRASTSENGSFVYPMENMSIDGISFASNWNPTTTPNVFASSSLNIEVPPHQSDASGTSHDHFLHSSSAAAFFTVSENYAHQPPPPPNYDRQPFHVVDGGFIDLTMGSGRGPHKRKSPGIPPVCERGSTSRYINAGSSTDLPMSSELQQEKPNMDCQYLPRDQVTMPLTFRGSGLSIRGEGSLRNVRSRSTLDFESNLARTHLSGNHSHNYSTGLPIDHSSTMDPSGQSSSALTRDWSQMSTSHAHGRVLLPDTSALNCETSHFLVGSGTSNTPVDVGGYHHEFGTSRNPIVPQSFHNNLTQTARGVRSNFSQRSTPPFRPSSSLRLGHVAPSDDGLQMVADSYSSRHPRPLTTIGWRNSDRNGRSRISSDRYRPLADASGPHDRFSSEGFMIVDRGLPYGSRSMVDQHRDMRMDIDNMSYEELLALGERIGHVNTGLSEDLISKCTTETIYCSSEQSQEEGTCVICLEEYKDMDDIGTLKTCRHDYHVSCIRKWLSMKNKCPICKAPSLPDDKKDK 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2639 597 MobiDBLite consensus disorder prediction 427 443 - -
Alju03g2639 597 MobiDBLite consensus disorder prediction 425 462 - -
Alju03g2639 597 ProSiteProfiles Zinc finger RING-type profile. 544 586 IPR001841 -
Alju03g2639 597 SUPERFAMILY RING/U-box 532 591 - -
Alju03g2639 597 MobiDBLite consensus disorder prediction 187 207 - -
Alju03g2639 597 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 172 588 IPR045191 GO:0061630
Alju03g2639 597 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 509 590 IPR013083 -
Alju03g2639 597 FunFam E3 ubiquitin-protein ligase MBR2 isoform A 509 590 - -
Alju03g2639 597 Pfam Ring finger domain 543 586 IPR001841 -
Alju03g2639 597 CDD RING-H2_RNF24-like 542 588 - -
Alju03g2639 597 MobiDBLite consensus disorder prediction 387 402 - -
Alju03g2639 597 MobiDBLite consensus disorder prediction 387 409 - -
Alju03g2639 597 SMART ring_2 544 585 IPR001841 -
Alju03g2639 597 MobiDBLite consensus disorder prediction 283 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2639 Alju-ChrAlju03 52582803 52586105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2639 49 596 C3H Transcription Factor Family AT2G37150 40.998 4.10e-109 336