LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju03g2626	ATGAAGATTCTCTGTTCTTTGTTTACTTGTTTCTCACCATCGGTTCAAGACCAAACCACCCATCAAGGAGGAGAGAGTGAAGCAACATTTCGAGTATTCACGCACAGCGAATTGAAATCTGCGACCAGAAGTTTCGATTCCTCAAACAAGATCGGAGAAGGCGGTTTTGGCACTGTGTACAAGGGGCGGCTTCGGGATGGCACATTTGTGGCGGTCAAAGTTCTTTCGATCGAATTGGATTCCTTGCGAGGAGAGAAGGAATTTGTAGCAGAACTGGGCACGCTGGGCGATATCAAGCACCAGAATCTAGTGACTCTACGAGGTTGTTGTGTGGAAGGAGCTCACAGATACTTAGTCTACGAGTACATGGAAAACAACAGCCTTCACCACTACTTTCTAGGTTCACAGGAGGGGAGGATGAGATTTAGCTGGGAATCAAGGAGGGAAGTAGCCATAGGAGTGGCTCGAGGGCTTGCCTATCTTCACGAGGAAATCAAGCCCTATATTGTGCACAGGGACATCAAAGCCAGAAACATACTTCTTGATCGAAATTTGAGGCCCAAAGTTTCAGACTTTGGTCTGGCAAAGTTATTGAGAGACGACAAGTCTTACGTTACTACTCAAGTCGCAGGGACATTGGGTTATCTTGCTCCGGAATATGCCAGTTCTGGGAAGGTGACGAGAAAATCAGATGTTTACAGCTACGGAATATTACTCCTAGAAATTGTGAGCGGCCTACCAGTGGTTGATCCTTACCAAGACACGCAACGTTTCCTGGTTGAGAAGGCGTGGGCGACGTATGAAGCAGGGGATTTAACAAAAATGGTGGATGCAGAGCTAAAGGAAGAAAGCGAGGGAGAGGAAGAAGAAAGCGTAAGATTCTTGAAGGTGGGGTTGCTTTGCGCGCAAGAAACAGCGAAGCTGAGGCCAAGAATGTCAGAAGTGGTTGAAATGTTGAGCAACAAGATTGAAATGTTAAATGTGAGTATTTCAAAACCGGGGCTTGTTCCTGATCTTAGGGCTATAAGAACTAGAGAGGCTCCCCATTCTGAGGTTTCCACTTCCAGTGCTGCAACCTATGCATCTTCCATCTGGAGTTCCGCCAATCTTGCCCGTTAA	1119	0.4674	MKILCSLFTCFSPSVQDQTTHQGGESEATFRVFTHSELKSATRSFDSSNKIGEGGFGTVYKGRLRDGTFVAVKVLSIELDSLRGEKEFVAELGTLGDIKHQNLVTLRGCCVEGAHRYLVYEYMENNSLHHYFLGSQEGRMRFSWESRREVAIGVARGLAYLHEEIKPYIVHRDIKARNILLDRNLRPKVSDFGLAKLLRDDKSYVTTQVAGTLGYLAPEYASSGKVTRKSDVYSYGILLLEIVSGLPVVDPYQDTQRFLVEKAWATYEAGDLTKMVDAELKEESEGEEEESVRFLKVGLLCAQETAKLRPRMSEVVEMLSNKIEMLNVSISKPGLVPDLRAIRTREAPHSEVSTSSAATYASSIWSSANLAR	372

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju03g2626	372	FunFam	Cysteine-rich receptor-like protein kinase 2	123	327	-	-
	Alju03g2626	372	Gene3D	Phosphorylase Kinase; domain 1	9	122	-	-
	Alju03g2626	372	CDD	STKc_IRAK	51	319	-	-
	Alju03g2626	372	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	169	181	IPR008271	GO:0004672\|GO:0006468
	Alju03g2626	372	Pfam	Protein kinase domain	47	315	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju03g2626	372	SMART	serkin_6	45	326	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju03g2626	372	SUPERFAMILY	Protein kinase-like (PK-like)	27	319	IPR011009	-
	Alju03g2626	372	ProSiteProfiles	Protein kinase domain profile.	45	326	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju03g2626	372	FunFam	Serine/threonine-protein kinase receptor	14	122	-	-
	Alju03g2626	372	ProSitePatterns	Protein kinases ATP-binding region signature.	51	73	IPR017441	GO:0005524
	Alju03g2626	372	Gene3D	Transferase(Phosphotransferase) domain 1	123	331	-	-
	Alju03g2626	372	PANTHER	CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3	29	365	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju03g2626	Alju-ChrAlju03	52505649	52507254	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju03g2626	33	364	Receptor kinase-like Gene Family	AT1G56120	49.249	1.65e-95	301

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Alju03g2626		Pkinase	4.3e-50	CL0016