Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2624 ATGCAAGTCCTCTATGCACATGGCCTTCGAGGGATTTCTTCTCCTGTCTTCCTTCAGCTAATTCTGCTCCTCCTATGCTCATCTTGCGCATATGGGTTTGGTACGATGGGTCCAATATCGGCCTCATTTGGTAAAGATGAATTCTTTTGCGCCATCGATGCAAGTGGGAAGCAGGATGTCATTTGCTGGGGCAAGAACAACACTTCATCGGTTCCACCTTCGTCTTCAGCTTCACCTTCTGTTACTGACAGCCCTCCCATGGCAGCTTTATCCGGTGGCGAAGGGTTTATGTGCGGCATTCAAGCAAGCACTTCGCAAGCATCTTGCTGGAGCGCCACAAAACCAACAATAGATCTTGTGCCTCCTGCATACCAATCCTATTCTTACTCTCAAATTGCAGCAGGTAAAAATCATGTTTGTGCCATCAGGGGATCTTATTATTCTCATGAAGATTCCGGAATTGTTGATTGTTGGGAAATTGTAAGAACTTCGGACAACAGCTTAAAATGGAAACAGAGCGATTTGTATTACGATCAGTCAACTAGCAATCTGGCATTAAACAAAATTGTAGCAGGTGAGGGATTTTCTTGTGGTGCGGTCAGAGACGGCGGGCTTGTCTGTTGGGGACCTACATCAACGAGCTTAGGGGTATCGAATGTGTCTGAGAAATTCTCAATCTTGGTTTCGGGAAGAAGTTCAGTTTGTGGGCTTTTGAACGTTTCTGGAGATTTGACATGTTGGGGTGACAAAGATTCGTTTGCTGATCCACCTGATGGGACTGGATTAATCTCTCTGTCAGCTGGGGGTCACCATTATTGTGGTATTCGAGCAGATAATCATATAGTGGAGTGTTGGGGCAGTTTCAATTCCTCTGCGGTTCCAAAAGGTTCTGGATTTATGGCAATTGCTTCTTCAGATTATAGAGCTTGTGGCGTTAGAGAAGAAGATCTTCTCATTGATTGCTGGTTGGTGAATAAGTCAACCGCCGAGTTTGATCCTCCATTGGAATTATCAAGTCCAGGTCTCTGCAGTTCCAGTTCATGCGGTCCAGGTGAGTTTGCTTTCAATGTTAGTAATCTGAACGAGCCAGGCTTAACAAGCCTCTGTGTTCGAAAAGATTTGAGGATCTGTTCGCCTTGTGGCTCAAATTGTTCACAAGGCTTTTTCTTGTCCAGTCCTTGCACTGAGAATTCCGATAGAGTATGCACTGATTGTTCTCTTTGCCAAAATAGCTCCTGCTGGGATGTTTGTCGACATGAGTCATCTCCAGATGTTGTTCATAAGAAAAAATGGCACCATTTGCGTCGGTTATTGGTCATAATTGGCTCTGCTGCTCTGGGATTCTTGTTCATCATAACTTGTGGGTGTATTCTTCCATGTTTGATCACTAAGAAAGAGTCCAAATCTGGTACGGCCAAACCAGAGCAGCAAGCTGATCATAATATTGATCTTCACTCATTTCCTTCAACAACTTCCTGTCCTGGGATGCCTCAGATCTTCAGACTCTCCGAGTTAAAGGATGCAACTAATGGGTTCAAGGAATTCAACGAGCTTGGTAGAGGAAGTTATGGCTTTGTATACAAAGCTGTATTAGCAGATGGCAGGGTAGTTGCAGTGAAGAGGGCCAATGCCGCAACAATTATTCACACAAACAATCGTGACTTTGAAATGGAACTGGAAATCCTCTGCAAAATCCGTCACTGTAATATAGTGAACTTATTGGGTTACTGCGCAGAGATGGGGGAGAGGCTTCTTGTTTACGAGTATATGCCATATGGAACTCTTTATGATCACCTTCACGGTGGGCTTTCTCCTCTGAATTGGGGCCTCAGGCTAAAGATATCAATGCAAACTGCAAAAGGTCTTGAGTATCTCCATATGGAACTAGCTCCACCAATTGTGCACAAGGATCTCAAAAGTTCAAACATTCTCTTGGATTCTGAATGGGGAGCGAGAATTTCAGACTTTGGACTCCTCACTTGTGGTGACAAAGATCAAAATGGGGATGTGCAGAGCGATGTTTACAACTTTGGGGTTGTGTTGCTAGAGATTCTGAGTGGAAGAAAAGCTTATGATGGAGAATTTGTGCCTCCCAACATAGTTGAGTGGGCAGTGCCTCTGATAAAACAGGGGAAAGCTGCTGCTATAATTGACCGCTCGGTTCCTCTTCCAAGGATCGTTGAGCCATTGCTGAAGCTAGCTGATATTTCAGAACTTGCTGTGAGAGACAATCCCAGCGAGCGTCCGGCAATGTCAGAGATAGCATCTTGGTTGGAGCAGATAGTGAAGGACGGTTTGATCTTGTAG 2307 0.4469 MQVLYAHGLRGISSPVFLQLILLLLCSSCAYGFGTMGPISASFGKDEFFCAIDASGKQDVICWGKNNTSSVPPSSSASPSVTDSPPMAALSGGEGFMCGIQASTSQASCWSATKPTIDLVPPAYQSYSYSQIAAGKNHVCAIRGSYYSHEDSGIVDCWEIVRTSDNSLKWKQSDLYYDQSTSNLALNKIVAGEGFSCGAVRDGGLVCWGPTSTSLGVSNVSEKFSILVSGRSSVCGLLNVSGDLTCWGDKDSFADPPDGTGLISLSAGGHHYCGIRADNHIVECWGSFNSSAVPKGSGFMAIASSDYRACGVREEDLLIDCWLVNKSTAEFDPPLELSSPGLCSSSSCGPGEFAFNVSNLNEPGLTSLCVRKDLRICSPCGSNCSQGFFLSSPCTENSDRVCTDCSLCQNSSCWDVCRHESSPDVVHKKKWHHLRRLLVIIGSAALGFLFIITCGCILPCLITKKESKSGTAKPEQQADHNIDLHSFPSTTSCPGMPQIFRLSELKDATNGFKEFNELGRGSYGFVYKAVLADGRVVAVKRANAATIIHTNNRDFEMELEILCKIRHCNIVNLLGYCAEMGERLLVYEYMPYGTLYDHLHGGLSPLNWGLRLKISMQTAKGLEYLHMELAPPIVHKDLKSSNILLDSEWGARISDFGLLTCGDKDQNGDVQSDVYNFGVVLLEILSGRKAYDGEFVPPNIVEWAVPLIKQGKAAAIIDRSVPLPRIVEPLLKLADISELAVRDNPSERPAMSEIASWLEQIVKDGLIL 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2624 768 Gene3D Phosphorylase Kinase; domain 1 475 589 - -
Alju03g2624 768 SUPERFAMILY RCC1/BLIP-II 39 289 IPR009091 -
Alju03g2624 768 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Alju03g2624 768 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 20 762 - -
Alju03g2624 768 ProSitePatterns Protein kinases ATP-binding region signature. 518 540 IPR017441 GO:0005524
Alju03g2624 768 Gene3D - 182 347 IPR009091 -
Alju03g2624 768 Gene3D - 34 181 IPR009091 -
Alju03g2624 768 Gene3D Transferase(Phosphotransferase) domain 1 590 667 - -
Alju03g2624 768 Gene3D Transferase(Phosphotransferase) domain 1 668 765 - -
Alju03g2624 768 FunFam Serine/threonine-protein kinase-like protein CCR1 667 765 - -
Alju03g2624 768 Pfam Protein tyrosine and serine/threonine kinase 516 663 IPR001245 GO:0004672|GO:0006468
Alju03g2624 768 ProSiteProfiles Protein kinase domain profile. 512 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2624 768 SUPERFAMILY Protein kinase-like (PK-like) 486 759 IPR011009 -
Alju03g2624 768 SMART serkin_6 512 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2624 768 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 347 402 IPR001368 GO:0005515
Alju03g2624 768 FunFam serine/threonine-protein kinase-like protein CCR1 481 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2624 Alju-ChrAlju03 52496676 52498982 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2624 16 760 Receptor kinase-like Gene Family AT3G59420 31.936 9.99e-115 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Alju03g2624 Pkinase 1.9e-30 CL0016