Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2619 ATGATACACTTGTATATATATCCAATAAGTCTCCTCACCGGTAAGGAATCACAGGCTGAATTCGAGTTCTATGGCTTCTGGTTCCAGGATGATCTTGAGACTGAGTTGAAACCAAGCAAAGAAAATCACATGTCAAAGACAGCCTATAAGATGAATGGAAAACAGATGGACATGTGGAAGGAAAGGGAACTTTCAAGGGTCTTCTCTGAGGATTATGATGCGACAGAGAAGTTGATATTGGACCCTAGGGGACCAAGAGTGAACAGATGGAACAAAATCTTCTTAGTGGCATGTCTGGTTTCTTTATTTGTGGATCCCTTGTTCTTTTACTTGCCTGTGGCTAAGAAAGACAAGTGCATTGATTTGTCCATTCGCCTCGAAGTGTCCCTCACCATAATTCGCTCCATGGTGGATGCATTTTACATATTTCAGATTTATGTTCGCTTCCAAACCGCTTATGTTGCTCCTTCCTCTCGCGTTTTTGGTAGAGGAGAGCTCATCATTGACCCTTCCAAGATATCATCCAAATATCTTCAAAGAGACTTCTGGCTTGATGTTGCGGCTGCCCAACCTCTTCCTCAGGTGTTGGTATGGCTTGTAATTCCAAATCTCAAGTGTTCACAAATGATTACTTCAAGGCATATGCTGCGCCTTGTTACCATTTTCCAGTACTTTTTAAGGTTATATCTCATCTTCCCCCTATCATCTCAAATCGTCAAGGCTAATGGGGTGATGATGGAAAAAGCATGGGCTGGGGCAGCATATAATCTCATGCTCTATATGCTAGCAAGTCATGTTTTAGGGTCGTGCTGGTACCTCTTATCAATTGAAAGGCAGGAGGAGTGCTGGAAAAAAGTTTGTACTCTACAGCACCCACAATGCCAGTATTATTATCTGGAGTGTGGAAGTGTGGGTGATCCGAATAGGGTAGCTTGGTTTAGAACAAGCAATATCTCTGGTCTATGTGATGATCCCAGCAGTGATTTCTTTAAATTTGGCATTTTTGCTGACGCCCTGACTTTGGGAATCACGGCCTCGTCCCAGTTCTTCATCAAATACTTTTACTGTCTTTGGTGGGGACTCAGGAATCTCAGCTCTCTGGGACAGAACCTATTGACAAGTCCTCAGGTTGCAGAGATTAATTTTGCTGTGATCATAGCAATTCTAGGCCTGGTACTTTTCGCCCAGCTTATAGGCAACATGCAGATGTACCTGCAATCAACAACTATGAGGCTGGAAGAATGGAGAATAAGAAGAACAGATACAGAGAGATGGATGAGACACAGGCAGCTACCTCATGAGCTGAAGCAAAACGTTCGACGATACGATCAATTCAGATGGGTGGCCACACGTGGAGTTGACGAGGAAGTCATTCTCAGAGACCTTCCTGCCGATCTCAGACGCGACATTAAACGTCACCTCTGCCTCAACCTAGTCCGACAAGTACCATTATTTGATCAGATGGAGGAGAGGATGCTGGATGCGATATGCGAAAGGCTGAAGCCATATCTGTGCACACCAGGGACAAGGTTGATTCGTGAAGGTGACCCTGTGAATGAGATGCTGTTCATAGTTCGAGGTCGCTTGGATTCATACACAACCAATGGTGGCAGAACAGGGTTCTTCAATTCCTGCAGAATAGGGGCAGGTGATTTCTGCGGCGAAGAGCTCTTACCCTGGGTTCTCAACCCTCGTCCTAATGCCATGCTTCCTTCATCAACTCGCACAGTGAAAGCCATGACCCATGTCGAAGCTTTTGCACTCATAGCTGAAGATTTACAGTTCGTGGCAGATCAGTTTCGGAGGCTGCACAGCAAACAGTTGAGGCACACGTTTAGGTTTTATTCTCAGCAATGGAGGACATGGGCTGCTTGTTTCATACAAGCGGCTTGGTTTAACTATAAGAGGAGAAGAGAGGCAAGTGAGCTCAAGAGGAAGCAGAATCAGTACTTGGCTGTGATGCCCCCTGTGTCTTCAACTTATAACGCCATGGAATATTTCTCTGCACCTCTGCAACCTCACATGGAGTACTCCAGTAGTATTGCTCTTACAAGGTATCCCTTGAGAGGTGGGAGCTTGCGATATGGTTCTGATCTTGACATTCTTCGTTCGTTGAGGAAGCCTGTTGAACCTGACTTTACCATGGAAGACACATGA 2157 0.4516 MIHLYIYPISLLTGKESQAEFEFYGFWFQDDLETELKPSKENHMSKTAYKMNGKQMDMWKERELSRVFSEDYDATEKLILDPRGPRVNRWNKIFLVACLVSLFVDPLFFYLPVAKKDKCIDLSIRLEVSLTIIRSMVDAFYIFQIYVRFQTAYVAPSSRVFGRGELIIDPSKISSKYLQRDFWLDVAAAQPLPQVLVWLVIPNLKCSQMITSRHMLRLVTIFQYFLRLYLIFPLSSQIVKANGVMMEKAWAGAAYNLMLYMLASHVLGSCWYLLSIERQEECWKKVCTLQHPQCQYYYLECGSVGDPNRVAWFRTSNISGLCDDPSSDFFKFGIFADALTLGITASSQFFIKYFYCLWWGLRNLSSLGQNLLTSPQVAEINFAVIIAILGLVLFAQLIGNMQMYLQSTTMRLEEWRIRRTDTERWMRHRQLPHELKQNVRRYDQFRWVATRGVDEEVILRDLPADLRRDIKRHLCLNLVRQVPLFDQMEERMLDAICERLKPYLCTPGTRLIREGDPVNEMLFIVRGRLDSYTTNGGRTGFFNSCRIGAGDFCGEELLPWVLNPRPNAMLPSSTRTVKAMTHVEAFALIAEDLQFVADQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAAWFNYKRRREASELKRKQNQYLAVMPPVSSTYNAMEYFSAPLQPHMEYSSSIALTRYPLRGGSLRYGSDLDILRSLRKPVEPDFTMEDT 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2619 718 Gene3D - 93 408 - -
Alju03g2619 718 CDD CAP_ED 484 615 IPR000595 -
Alju03g2619 718 SUPERFAMILY Voltage-gated potassium channels 81 406 - -
Alju03g2619 718 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 63 659 - -
Alju03g2619 718 PRINTS EAG/ELK/ERG potassium channel family signature 145 154 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju03g2619 718 PRINTS EAG/ELK/ERG potassium channel family signature 262 272 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju03g2619 718 PRINTS EAG/ELK/ERG potassium channel family signature 353 370 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju03g2619 718 PRINTS EAG/ELK/ERG potassium channel family signature 397 406 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju03g2619 718 PRINTS EAG/ELK/ERG potassium channel family signature 447 454 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju03g2619 718 PRINTS EAG/ELK/ERG potassium channel family signature 379 390 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju03g2619 718 FunFam Cyclic nucleotide-gated ion channel 1 411 475 - -
Alju03g2619 718 ProSiteProfiles cAMP/cGMP binding motif profile. 484 565 IPR000595 -
Alju03g2619 718 SMART cnmp_10 484 615 IPR000595 -
Alju03g2619 718 SUPERFAMILY cAMP-binding domain-like 414 606 IPR018490 -
Alju03g2619 718 Gene3D Jelly Rolls 482 602 IPR014710 -
Alju03g2619 718 FunFam Cyclic nucleotide-gated ion channel 1 482 600 - -
Alju03g2619 718 Pfam Cyclic nucleotide-binding domain 507 595 IPR000595 -
Alju03g2619 718 Gene3D Helix hairpin bin 411 475 - -
Alju03g2619 718 Pfam Ion transport protein 90 411 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2619 Alju-ChrAlju03 52443603 52446681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2619 60 716 Ion Channels AT2G28260 64.742 0.0 880