Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2610 ATGCAGTCCAATAATTTTCCAATGAAGTGCTTTTCATTCTACTACGGAGTTAAGAAGGATGATCCGAAGAGCATTAAGTCCATTTCGGGTCTGTCTAACTATTCTGCGTATGGCGAGTGTGATCTGAGAAGATCTGGCTCTGAATTAAATTCTCAGAATGTTTCCGACAATAGCACAGACTCCCTTAGGAGAACTTCGTTTCCCAGTTTGTCTCAAAGACCCAGCAACCTGAGAGTGTTTACTGTGTCTGAACTGAAATCAGCCACTAAAAATTTTGGCCGCACTGTTATGATTGGAGAGGGTGGATTTGGCTGTGTCTACAAGGGATTGATCAAGAGCTTAGAGGACCCATACAAAAAAATTGAAGTTGCAGTTAAACAACTTGGTAGAAGAGGAATGCAGGGCCATAAGGAATGGGTAACAGAAGTGAATGTTCTGGGCATTGTTGAGCATCCTAATCTTGTGAAACTTGTGGGTTACTGTGCTGAGGATGATGAAAGAGGAATCCAACGGCTTTTGGTTTATGAATATATGCCCAACAGAAGTGTGGAGCACCATTTATCCCCCCGATCAGAGACCCCTCTCTCATGGAGTAGGAGATTAAAAATAGCTCAGGATGCAGCTCGTGGCTTAACATATCTTCATGAAGAAATGGATTTTCAGATAATCTTCAGAGATTTCAAATCTTCCAATATCCTTTTGGACGATCAGTGGAATGCAAAGCTTTCAGATTTTGGATTAGCAAGATTGGGCCCATCAGAAGGGTTAACTCACGTCTCAACAGCGGTTGTGGGAACAATGGGATACGCTGCTCCTGAATATATTCAAACTGGACGTCTTACATCAAAAAGTGATGTGTGGAGTTATGGCGTATTTCTGTACGAACTCATAACTGGCAGGCGCCCTGTGGATCGAAATCGTCCCAAGGGTGAACAAAAGCTCTTGGAGTGGGTGAGGCCATACCTATCAGATGGGAAGAAATTTCTACTAATATTGGATCCAAGGCTTGACAGGAAACCCCTCTTCAAGTCAGCACAGAGACTCGCCGTTATAGCTAACCGATGCTTGGTCAAAAACCCAAAGAATCGCCCAAAAATGAGTGAGGTGTTGGAAATGGTGAATCGACTTGTAGAATCTTCAACTGCCGCTAGTCCACAGATACCCCTGAAGAGTTCGGAATCCGCCGAAGGTTCACAGGGCACTGAAACCAAGAAAAAGAGGAGGATCATGGATCTAAAACCTGGAGAAAATAGTTGCTTTGTTTGGTTGTGGAGACCAAAGCTTTTAAAACTCAAGTCTCATCCGGAGACTTATGAGAAGGGATATGTTCCCATGAAATTTGGCGACTATTCAGATAAAATGTCCAGATTCGGTATGATTCTGCAGCTTACCATTCGGGTCCGGGGAAACAATAGGACTAGGAGGTCCATACTTGATCGAGAAGACCCAGAATTACTGGCTTCCCTGCCCATATGCACATCTCTCCTCTGCTATATAAATGCCTCCCCAACGAAGCTGAACCTCTCATGTTTCTATTTACTGCTTTATGGTGTCATATCAGACATAACATTCATGGCTGTGAAGGAGAGCAACACAGGCCAAAGTAATCACCATCTTCATCATCATCAACAAGAGGATCAGCAAATTTGTGACCCCTGCAAGTCGTTTGGGCAGAAGTGCAGCCACCTGGTGAAGAAGCAGAGAGCAAAGTTCTACATTGTTCGCCGTTGCATAGCGATGCTTCTGTGTTGGCATGAGCGTGGTGAGCAGTGA 1773 0.4416 MQSNNFPMKCFSFYYGVKKDDPKSIKSISGLSNYSAYGECDLRRSGSELNSQNVSDNSTDSLRRTSFPSLSQRPSNLRVFTVSELKSATKNFGRTVMIGEGGFGCVYKGLIKSLEDPYKKIEVAVKQLGRRGMQGHKEWVTEVNVLGIVEHPNLVKLVGYCAEDDERGIQRLLVYEYMPNRSVEHHLSPRSETPLSWSRRLKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDDQWNAKLSDFGLARLGPSEGLTHVSTAVVGTMGYAAPEYIQTGRLTSKSDVWSYGVFLYELITGRRPVDRNRPKGEQKLLEWVRPYLSDGKKFLLILDPRLDRKPLFKSAQRLAVIANRCLVKNPKNRPKMSEVLEMVNRLVESSTAASPQIPLKSSESAEGSQGTETKKKRRIMDLKPGENSCFVWLWRPKLLKLKSHPETYEKGYVPMKFGDYSDKMSRFGMILQLTIRVRGNNRTRRSILDREDPELLASLPICTSLLCYINASPTKLNLSCFYLLLYGVISDITFMAVKESNTGQSNHHLHHHQQEDQQICDPCKSFGQKCSHLVKKQRAKFYIVRRCIAMLLCWHERGEQ 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2610 590 SUPERFAMILY Protein kinase-like (PK-like) 66 373 IPR011009 -
Alju03g2610 590 ProSiteProfiles Protein kinase domain profile. 92 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2610 590 FunFam Serine/threonine-protein kinase PCRK2 178 386 - -
Alju03g2610 590 CDD STKc_IRAK 98 376 - -
Alju03g2610 590 Gene3D Phosphorylase Kinase; domain 1 72 177 - -
Alju03g2610 590 Gene3D Transferase(Phosphotransferase) domain 1 178 393 - -
Alju03g2610 590 Pfam Protein tyrosine and serine/threonine kinase 97 371 IPR001245 GO:0004672|GO:0006468
Alju03g2610 590 ProSitePatterns Protein kinases ATP-binding region signature. 98 126 IPR017441 GO:0005524
Alju03g2610 590 MobiDBLite consensus disorder prediction 47 69 - -
Alju03g2610 590 PANTHER OS01G0588500 PROTEIN-RELATED 59 375 - -
Alju03g2610 590 Pfam DVL family 565 583 IPR012552 GO:0008285
Alju03g2610 590 FunFam Serine/threonine-protein kinase BIK1 59 177 - -
Alju03g2610 590 MobiDBLite consensus disorder prediction 382 398 - -
Alju03g2610 590 MobiDBLite consensus disorder prediction 382 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2610 Alju-ChrAlju03 52376292 52387704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2610 8 376 Glycoside Hydrolase AT3G07070 42.895 2.72e-89 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Alju03g2610 PK_Tyr_Ser-Thr 4.6e-47 CL0016