Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju03g2598 | ATGCCGGGTGAAGAGAAGAAGCCTTTACCTCTAGATGAAGATTTACCTGGGATGGGCCAGTATTACTGCCTTCACTGCGATCGATACTTCTCCAATGTGGCTGTGAGGGACGAGCATTTTAGGACCAAAGGGCACAAAAAACGTGTAAAACAAATGATGGGACCTGCACCACATACTCAACTTGATGCCGAATTAGCTGCAGGGATGGGCATGCCAGATAATGGTCCTAAGCTCATGTCTACGTGA | 246 | 0.4756 | MPGEEKKPLPLDEDLPGMGQYYCLHCDRYFSNVAVRDEHFRTKGHKKRVKQMMGPAPHTQLDAELAAGMGMPDNGPKLMST | 81 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju03g2598 | 81 | SUPERFAMILY | beta-beta-alpha zinc fingers | 8 | 72 | IPR036236 | - | |
| Alju03g2598 | 81 | SMART | ZnF_U1_5 | 18 | 52 | IPR003604 | GO:0003676|GO:0008270 | |
| Alju03g2598 | 81 | Gene3D | Classic Zinc Finger | 8 | 71 | - | - | |
| Alju03g2598 | 81 | Pfam | Zinc-finger double-stranded RNA-binding | 20 | 46 | IPR022755 | - | |
| Alju03g2598 | 81 | PANTHER | EXPRESSED PROTEIN | 4 | 80 | - | - | |
| Alju03g2598 | 81 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 23 | 45 | IPR013087 | - | |
| Alju03g2598 | 81 | FunFam | Zinc finger protein 593 | 7 | 71 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju03g2598 | 2 | 81 | C2H2 Transcription Factor Family | AT2G36930 | 80.000 | 5.14e-44 | 139 |