Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2552 ATGTTGGTTCCTCCATGGCTCGAACCTCTCCTAAACGCATCGTTTTTCAGCGTTTGCCGGATTCACGGAGACGCCGCCAGGAGCGAGTGTAATATGTACTGTCTGGATTGCAATGGCGACCCGTTTTGTTTTTATTGCCGTTCTTCGAGGCACAAGGATCATCAAATAAGGAGATCTTCGTATCACGATGTAGTAAGAGTTTCAGAAATCCAGAAGGTACTGGATATAAGTGGAGTACAGACGTATGTGATAAACAGTGCGCGAGTACTGTTTCTAAACGAGAGGCCTCAGCCAAAATCATCATCTGGGAAAGGAGGAGCTCACATTTGTGAGATTTGTGGAAGAAGCCTCTTGGACCCTTTTCGTTTCTGTTCTTTGGGATGTAAGCTTGTTGGAATAAAGAGAATTGGAAATGCGAGCTTTGAGTTGGAGGCGGCATCAGGACAAGAAGAAGTATTGCGTGAAGGGTCACAACAAGATATGTATCCAGCCACGCCTCCTCCACCGGCTGCTTCATCTGCAAGAAGAAGAAAAGGAATTCCTCATAGAGCTCCTTTTGCCTCCTAG 567 0.4621 MLVPPWLEPLLNASFFSVCRIHGDAARSECNMYCLDCNGDPFCFYCRSSRHKDHQIRRSSYHDVVRVSEIQKVLDISGVQTYVINSARVLFLNERPQPKSSSGKGGAHICEICGRSLLDPFRFCSLGCKLVGIKRIGNASFELEAASGQEEVLREGSQQDMYPATPPPPAASSARRRKGIPHRAPFAS 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2552 188 MobiDBLite consensus disorder prediction 150 188 - -
Alju03g2552 188 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 186 - -
Alju03g2552 188 Pfam PLATZ transcription factor 57 130 IPR006734 -
Alju03g2552 188 SUPERFAMILY B-box zinc-binding domain 18 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2552 Alju-ChrAlju03 51958071 51959191 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Alju03g2552 PLATZ 3.1e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1442 01 11424734 11425969 Alju03g2552 03 51958071 51959191 CCT