Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju03g2544 | ATGGAACTCTCTCTACTCCGTCATCATTGCCGCCATTACACAATCCTCCATTCCCCTCTAAGCTCCATTCAGTCTTCAAGGATGAAACACAAGAACCTTTACAGCACAAGTTCGCTTAGGCTACCCTGCCGCTGTTCATATTCTTCCTCTGATCAGTCTGCTTCCGAACCATCCACTCTATCTTTGCAGATTGAGGGAAGAAGGGCATTACTCACTGCTCTTTTGACGACTGCTGCTGGAGTTTATTCGTGTGATGTGGCTGGAGCAGTTAGCACAAGTAGAAGAGCACTTCGTGGATCGAAAATTCCGGAAAATGAATTCAAAACCCTGCCTAATGGTCTCAAGTATTATGATTTGAAGGTTGGAAGTGGAGCTGAGGCTGTGAAGGGATCCCGTGTTGCTGTTCACTATGTTGCTAAGTGGAAGAATATTACCTTTATGACTAGCAGACAAGGAATGGGTGTTGGAGGAGGAACGCCATATGGATTTGATGTAGGCCAATCTGAGAATGGAACTGTCCTTAAAGGGTTAGATTTAGGGGTGCAAGGCATGCGAGTAGGAGGCCAGAGGTTGTTAATTGTTCCTCCTGAACTGGCCTATGGAAGCAGAGGAGTCCAGGAGATCCCTCCAAATGCAACAATAGAGATAGATGTTGAGCTGCTTTCCATCAAACAAAGCCCATTTGGGACTGCGGTAAAGATAGTTGAAGGCTGA | 714 | 0.4608 | MELSLLRHHCRHYTILHSPLSSIQSSRMKHKNLYSTSSLRLPCRCSYSSSDQSASEPSTLSLQIEGRRALLTALLTTAAGVYSCDVAGAVSTSRRALRGSKIPENEFKTLPNGLKYYDLKVGSGAEAVKGSRVAVHYVAKWKNITFMTSRQGMGVGGGTPYGFDVGQSENGTVLKGLDLGVQGMRVGGQRLLIVPPELAYGSRGVQEIPPNATIEIDVELLSIKQSPFGTAVKIVEG | 237 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju03g2544 | 237 | PANTHER | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA | 105 | 232 | - | - | |
| Alju03g2544 | 237 | Gene3D | - | 90 | 231 | IPR046357 | GO:0003755 | |
| Alju03g2544 | 237 | SUPERFAMILY | FKBP-like | 102 | 224 | - | - | |
| Alju03g2544 | 237 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 130 | 224 | IPR001179 | GO:0003755 | |
| Alju03g2544 | 237 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 126 | 221 | IPR001179 | GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Alju03g2544 | Alju-ChrAlju03 | 51883422 | 51886328 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju03g2544 | 119 | 223 | Calmodulin-binding Proteins | AT5G48570 | 30.909 | 4.54e-07 | 48.1 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Alju03g2544 | 03 | 51883422 | 51886328 | Alju03g2544 | 03 | 51883422 | 51886328 | ECH |