Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2537 ATGGGAGACAAGCACGAAGAGGATAGGACTGAGAGCAGCGATTTCACTTCAGAGGACGAAGGCACGGACGACTATCGACGGGGAGGTTACCACGCTGTGCGAGTCGGGGATACCTTCAAGAATGGTCGCTATGTTGTTCAAAGCAAACTCGGTTGGGGGCATTTCTCCACCGTCTGGCTCGCCTGGGACATACCACTTTCTAGATATGTGGCCCTGAAAGTTCAAAAGAGCGCTCAGCATTACACGGAGGCAGCCATGGACGAGATAACCATTTTACAACAGATTGCAGATGGAGACCCAGAAGATAAAAAGTGCGTGGTGAAGCTTTTGGATCACTTCAAGCATTCAGGTCCCAATGGACAACATGTTTGTATGGTATTTGAATACCTTGGGGATAATCTTTTAACGCTTATCAAGTATACTGATTACCGAGGATTGCCAATCAACATGGTTAAAGAGATATGCTTTCACATTTTGGTTGGATTGGATTACTTACATAAGCAACTTTCTATAATACATACTGACTTGAAGCCTGAGAACATCCTCTTATTATCAATGATAGATCCATCTAAGGATCCTAGAAAGTCTGGTGCTCCCTTAATTCTACCAAATGCTAAAGATAAAACAGCACTTGAATTGGGAATTGGGAAAGAAGTGAAAACATCAAATGGGGAATTAATGCGGATTCATAAGAAAAAGATTAAAAGGAAAGCTAAGCAGGCAGCTCAGGGATGTGTAGAGATGGAAGCTTCCGAGGAAGTTGAGGGGGATCCTGAAACATCTGGTGCCGCAGAATCATCTGCAAATGCAATACAAAATGCAGGTTCTGCAGGAGAACAACCTTCTAGTTCTACAGGGACCAATAGGTTATCAGATGATGACAGGACAAAGGTAAACTGGTCAAAAAACCAGGGTAACAAAAGAGGAAGCCGGTCATTGAGGCAGAAGTTACTGAAATCAGTTGACCTAAACTGCAAATTAGTTGACTTTGGCAATGCTTGTTGGACGTATAAACAGTTTACAAATGATATTCAGACAAGACAATATCGGTGTCCAGAAGTGATCCTTGGATCAAAATATTCAACGTCAGCAGATCTTTGGTCCTTTGCTTGCATTTGTTTTGAGCTTGCAACTGGTGATGTGCTATTTGATCCTCATAGTGGTGACAATTTTGATAGAGATGAGGATCACTTAGCACTAATAATGGAGCTTCTGGGCATGATGCCACGTAAGATTGCATTAGGGGGCCGTTACTCCCGTGATTTTTTCAATAGATATGGTGACCTGAGGCACATCCGTCGTTTGCGTTTTTGGCCCTTGAACAAAGTTCTTGTCGAGAAATATGATTTCAATGAGCGAGATGCCAATGACTTGGCCGACTTTTTGGTTCCTATTCTAGACTTTGTTCCTGAGAAACGGCCTACGGCCGGTCAGTGCCTTCTGCATCAGTGGATCAGTGCCAGTCCCCGCCTTCTGGAGCCATCTTCTAACCACAATTCAGCCGCAGATGGCGCTATTTCTGACCAAAAGAAAAAGGATAAGGATGATAGAGAGGCCATGGAGGCAGGGATGGGGAATATTGCCATCAACTCAGATTCTAAGCCACACACGGATTTATCAGCTAAAGCCTGTCAAAGCAGTCAGAAGTAG 1650 0.4382 MGDKHEEDRTESSDFTSEDEGTDDYRRGGYHAVRVGDTFKNGRYVVQSKLGWGHFSTVWLAWDIPLSRYVALKVQKSAQHYTEAAMDEITILQQIADGDPEDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYTDYRGLPINMVKEICFHILVGLDYLHKQLSIIHTDLKPENILLLSMIDPSKDPRKSGAPLILPNAKDKTALELGIGKEVKTSNGELMRIHKKKIKRKAKQAAQGCVEMEASEEVEGDPETSGAAESSANAIQNAGSAGEQPSSSTGTNRLSDDDRTKVNWSKNQGNKRGSRSLRQKLLKSVDLNCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHSGDNFDRDEDHLALIMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLNKVLVEKYDFNERDANDLADFLVPILDFVPEKRPTAGQCLLHQWISASPRLLEPSSNHNSAADGAISDQKKKDKDDREAMEAGMGNIAINSDSKPHTDLSAKACQSSQK 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2537 549 ProSiteProfiles Protein kinase domain profile. 44 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2537 549 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 10 507 - -
Alju03g2537 549 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Alju03g2537 549 Gene3D Transferase(Phosphotransferase) domain 1 127 486 - -
Alju03g2537 549 MobiDBLite consensus disorder prediction 530 549 - -
Alju03g2537 549 CDD STKc_SRPK 33 485 - -
Alju03g2537 549 SMART serkin_6 44 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2537 549 MobiDBLite consensus disorder prediction 505 521 - -
Alju03g2537 549 SUPERFAMILY Protein kinase-like (PK-like) 38 492 IPR011009 -
Alju03g2537 549 MobiDBLite consensus disorder prediction 492 549 - -
Alju03g2537 549 FunFam Serine/threonine-protein kinase SRPK-like protein 315 485 - -
Alju03g2537 549 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Alju03g2537 549 Gene3D Phosphorylase Kinase; domain 1 20 126 - -
Alju03g2537 549 FunFam CMGC/SRPK protein kinase 30 129 - -
Alju03g2537 549 MobiDBLite consensus disorder prediction 1 27 - -
Alju03g2537 549 MobiDBLite consensus disorder prediction 262 289 - -
Alju03g2537 549 Pfam Protein kinase domain 321 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2537 549 Pfam Protein kinase domain 44 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2537 549 MobiDBLite consensus disorder prediction 246 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2537 Alju-ChrAlju03 51833303 51836998 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2537 10 534 EF-hand Containing Proteins AT5G22840 66.667 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Alju03g2537 Pkinase 5.7e-19 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g2537 03 51833303 51836998 Alju03g2537 03 51833303 51836998 ECH