Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2531 ATGCACACTAAGCTCTGCTCTCTTCTTCATAACATGAACAAGGCTTTTCCTTTAAACCTTGCATTGGCCTTGGCCTTCGCTTTACTCTGTTGTGTCTCAAAGTCTCTGGGTTTTACCCAAAATGACACTCACGCTCTCACTCAATTCCGCCACCAAGCTGATGCTCATGGCTATCTTCTCGTCAACTGGACCGGTGCCGACGCCTGCTCTGCTTTCTGGCGTGGCGTTCAGTGCTCCCCTAACGGCCAAGTCGTCGGAATCTCGCTTCCTTCTCTTAATCTCCGAGGCCCTGTTGATTCTCTGTCTTCGTTAAGCTACTTGCGCCTCCTTGACCTCCATGACAATCGCTTAAACGGCAGCGTTGCGCCTCTCTCTAACTGTACCAGCCTTGAACTTCTTTATCTCTCCGGGAATGACTTCTCCGGCGAGATACCGCCGGAGATAGCTTCCCTCACGCGTCTGCTCAGGCTTGACCTCTCCAACAACAACATCCGAGGTCCCATTCCTAAGGAACTGTCCAAATTGACTGCGCTTCTCACGCTTAGGCTACAGAACAATGAGCTCTCTGGTCATATCCCTGATCTTTCTGATTCTCTGCTCAAACTCAAGGAGCTCAACATGACCGACAACGAGTTTTATGGAAGCTTACCCGACGGAATGTTGAAGAAATTCGGTGACGTAAGTTTCTCTGGGAATAAAGGTCTATGTGGATCAAACCCATTACCGGTTTGTTCCTCCACAACAGAGAACTTTCCTTCTTCTTCAGCATCGGCTCCAACAATTCCTTCTAAACCAACCTCGTTACCCCAAACAAACGCAACTCCTCCCAAAATCCAACCCCGAAAGGGGTTAAGTACCGGAGTTATTGTAGCCATTGTGGTGGCGAATTGTGTGGCATTTCTGGTGATAACCTCTTTCATTGTTGCTCATTGTTGCGCCAGAGGACGAACCTCCGATTCTATGGTGGGTAGCGAAATTGGGAAGAGGAAAAGTGGGAGTAGCTATGGAAGTGAGAAAAAGGTGTACGCAAGCGGGTGTGTAGACAGTGACGAAACCACCGGAACGGACCGAAGCAGGCTTGTATTTTTTGATAGAAGGAGCCAATTTGAGCTGGAAGATTTGCTCCGAGCATCGGCAGAGATGCTGGGAAAGGGAAGCTTGGGAACAGTGTATAAGGCAGCGCTCGATGATGGATGCATCGTCGCGGTTAAGAGACTCAAAGATGCAAACCCATGCGTCCGGAAGGAGTTCGAACAGTACATGGATGTGATTGGAAAGCTCAAACACCCTAATATTGTGAGACTCAGAGCTTATTATTATGCCCGAGAAGAAAAGCTCCTCGTCTATGATTATCTCCCCAACGGAAGCTTGCATTATCTTCTTCACGGGAACCGTGGTCCAGGAAGAATCCCACTGGATTGGACTACGAGAATAAGCTTGGTTTTAGGGGCAGCCAGAGGACTTGCTCGGATTCATGCTGAGTATAGTGCAGCGAAAATACCTCACGGCAACATAAAATCTTCCAATGTTGTACTCGACAAGAATGGCGTTGCTTGCATCTCTGACTTCGGCTTGTCTCTGCTATTAAACCCTGTTCATGCAATCGCAAGATTGAGTGGATACAGAGCTCCCGAACAAGAAGACAGCAAGAAGCTGTCTCAGCAGGCAGACGTGTACAGCTTCGGTGTCTTGCTGTTGGAAGTTCTCACAGGCAAGACTCCATCCCAGGAGCCTTCACCGACACGTCCTAGGTTGGTTGACGAGGAACAAACTGTGGATCTTCCCAAATGGGTGCGATCTGTGGTGAAGGAAGAATGGACAGCTGAAGTGTTCGATCAAGAATTGTTGAGGTACAAGAACATAGAGGAAGAGCTTGTTTCCATGTTGCATGTGGGACTGTCGTGTGTGGTGGCAGAGGCAGAGAAGAGGCCATCCATGGCGGAAGTTGTTAAGATGATTGAAGAAATCAGGGTGGAGCAATCTCCTCTTGGGGAAGACTATGATGAGTCTCGCAATTCGCTTTCACCTTCCCTTCCCACCACTGAAGATGGACTGGCTTAA 2061 0.4876 MHTKLCSLLHNMNKAFPLNLALALAFALLCCVSKSLGFTQNDTHALTQFRHQADAHGYLLVNWTGADACSAFWRGVQCSPNGQVVGISLPSLNLRGPVDSLSSLSYLRLLDLHDNRLNGSVAPLSNCTSLELLYLSGNDFSGEIPPEIASLTRLLRLDLSNNNIRGPIPKELSKLTALLTLRLQNNELSGHIPDLSDSLLKLKELNMTDNEFYGSLPDGMLKKFGDVSFSGNKGLCGSNPLPVCSSTTENFPSSSASAPTIPSKPTSLPQTNATPPKIQPRKGLSTGVIVAIVVANCVAFLVITSFIVAHCCARGRTSDSMVGSEIGKRKSGSSYGSEKKVYASGCVDSDETTGTDRSRLVFFDRRSQFELEDLLRASAEMLGKGSLGTVYKAALDDGCIVAVKRLKDANPCVRKEFEQYMDVIGKLKHPNIVRLRAYYYAREEKLLVYDYLPNGSLHYLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHAEYSAAKIPHGNIKSSNVVLDKNGVACISDFGLSLLLNPVHAIARLSGYRAPEQEDSKKLSQQADVYSFGVLLLEVLTGKTPSQEPSPTRPRLVDEEQTVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLSCVVAEAEKRPSMAEVVKMIEEIRVEQSPLGEDYDESRNSLSPSLPTTEDGLA 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2531 686 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 27 658 IPR046959 -
Alju03g2531 686 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 452 665 - -
Alju03g2531 686 Gene3D Transferase(Phosphotransferase) domain 1 452 673 - -
Alju03g2531 686 CDD STKc_IRAK 382 656 - -
Alju03g2531 686 Gene3D Phosphorylase Kinase; domain 1 345 451 - -
Alju03g2531 686 MobiDBLite consensus disorder prediction 661 686 - -
Alju03g2531 686 SUPERFAMILY Protein kinase-like (PK-like) 380 654 IPR011009 -
Alju03g2531 686 SUPERFAMILY L domain-like 40 238 - -
Alju03g2531 686 Gene3D Ribonuclease Inhibitor 122 246 IPR032675 -
Alju03g2531 686 FunFam pollen receptor-like kinase 1 347 451 - -
Alju03g2531 686 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Alju03g2531 686 MobiDBLite consensus disorder prediction 248 280 - -
Alju03g2531 686 FunFam Nuclear pore complex protein NUP107 39 194 - -
Alju03g2531 686 Gene3D Ribonuclease Inhibitor 35 121 IPR032675 -
Alju03g2531 686 MobiDBLite consensus disorder prediction 248 279 - -
Alju03g2531 686 ProSiteProfiles Protein kinase domain profile. 376 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2531 686 Pfam Protein kinase domain 380 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2531 Alju-ChrAlju03 51767039 51769398 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2531 35 682 Receptor kinase-like Gene Family AT2G36570 66.517 0.0 881
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Alju03g2531 Pkinase 1.6e-34 CL0016