Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2526 ATGGAAGAAAAAGTTGTAAATGTTTTCGGGTCACCCGGAAACTCAGAGGCCGGGCAGCCTCTGCAACCCGTCGGAGTCTCGGTGCCTCAGGTAACGAACATGACGGTGAATATGAACTTGCAGAATAGTGGAGGCGCAACAGTCGGAGATGCAGCTACAATGACATCGCCTGCAAGTACTGGAGGAGGAGCACCAGGGAGTTTTGATTTGTTCGGAAAAAAGAAGAGAGGGAGGCCGAGAAAATATGATTCAGATGGGAAGCCGAGGGTGACGACGTCGTTTCAGGGTGCACCAGCACAACAAGGCTTTTCTTTGTCCCCAACCTCACCGTCTGAATTCTCCTCCAAAAGGGGTCGAGGAAGACCACCTGGCTCCGGCAACTGGAAGCTCCTCGCATCTTTAGGTGAGTTGTTTGCAAACACAGCAGGTGGGGATTTCACACCTCATGTCGTCACTGTTCATACTGGAGAGGATGTTGCCGGAAAAATCCTGTCATTTGCCCAGAAAGGTACTAGAGGAGTTTGTGTTCTTTCTGCCAATGGAGCTATATCTAATGTCACTCTACGGCAGCCTGGTTCTTCTGGTGGCTTATTAACATACGAGGGTCGGTTCGAGATTTTGTCTCTGTCAGGGTCATTCACAGTGTCTGATAATGGGGGACTAAAAAGTCGAACTGGTGGGTTGAGTGTCTCTCTGGCTGGCCCTGATGGTCGTGTGATAGGTGGTGGTGTTGCTGGTCTCTTGACTGCCGCCAGCCCAATCCAAATTGTGATGGGAAGCTTTATGCCGTATAGTCCCAGGGCACAGAAAAGAAAGCTACAACGTGAGAACACAGTGGCATCTCCAGTTTCTGGTGCAGATGTTGTGATGGCGGCAAGACCTATCTCACAGGCGAATCCTGGTGGTGGTGACAACTGTTTCACACCCATGGCCCAGCAGCAGCAGCAGCTTCCAGAACAAAGCCGCAGAGAATCAGACAACATTACAGGCAGTGGTAAACAGAGTTTAGCTGCCACACCCAATACTTCTGATTGGAATGGATTTGAAGAGTTGTCTGATCAGGGCCCAACCCCAGACATCAATATATCTTTGCCTGGGGAATAG 1104 0.5027 MEEKVVNVFGSPGNSEAGQPLQPVGVSVPQVTNMTVNMNLQNSGGATVGDAATMTSPASTGGGAPGSFDLFGKKKRGRPRKYDSDGKPRVTTSFQGAPAQQGFSLSPTSPSEFSSKRGRGRPPGSGNWKLLASLGELFANTAGGDFTPHVVTVHTGEDVAGKILSFAQKGTRGVCVLSANGAISNVTLRQPGSSGGLLTYEGRFEILSLSGSFTVSDNGGLKSRTGGLSVSLAGPDGRVIGGGVAGLLTAASPIQIVMGSFMPYSPRAQKRKLQRENTVASPVSGADVVMAARPISQANPGGGDNCFTPMAQQQQQLPEQSRRESDNITGSGKQSLAATPNTSDWNGFEELSDQGPTPDINISLPGE 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2526 367 MobiDBLite consensus disorder prediction 44 126 - -
Alju03g2526 367 MobiDBLite consensus disorder prediction 44 62 - -
Alju03g2526 367 ProSiteProfiles PPC domain profile profile. 143 286 IPR005175 -
Alju03g2526 367 SUPERFAMILY AF0104/ALDC/Ptd012-like 145 266 - -
Alju03g2526 367 MobiDBLite consensus disorder prediction 301 350 - -
Alju03g2526 367 Gene3D - 148 279 - -
Alju03g2526 367 MobiDBLite consensus disorder prediction 1 24 - -
Alju03g2526 367 Pfam AT hook motif 116 125 IPR017956 GO:0003677
Alju03g2526 367 Pfam AT hook motif 73 84 IPR017956 GO:0003677
Alju03g2526 367 MobiDBLite consensus disorder prediction 295 367 - -
Alju03g2526 367 MobiDBLite consensus disorder prediction 71 87 - -
Alju03g2526 367 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 45 324 IPR039605 GO:0003680
Alju03g2526 367 CDD DUF296 147 261 IPR005175 -
Alju03g2526 367 MobiDBLite consensus disorder prediction 88 115 - -
Alju03g2526 367 SMART AT_hook_2 73 85 IPR017956 GO:0003677
Alju03g2526 367 SMART AT_hook_2 116 128 IPR017956 GO:0003677
Alju03g2526 367 Pfam Plants and Prokaryotes Conserved (PCC) domain 148 261 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2526 Alju-ChrAlju03 51720540 51723119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2526 73 298 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 52.301 7.79e-67 213
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g2526 03 51720540 51723119 Alju03g2526 03 51720540 51723119 ECH