Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2518 ATGGAAATGGAGGATCATCATCATCATCACCGTCATCAACAACAGCATCAGCAACATCTTGACTATGCAACTATGGGGGATCTCCGCCACCTCATGACTGCACCCAGGCCCCTCTCGGCCGACCTCTTCCCGCATCACCCCAATTTCACGGCCGCCGGCTCCCACCACTACGACGCCTTGTCCTTCGGTCGTCATCAACTGATGCCTGATATCGTGCCTCCTGCCCTTCACGATTCTTCTCCTCTTAATACTAGCATTTCTGTGGCCACTCCCTCCGCCTCCGCCGCCGCCGCCGCCGCGGCTACTCCCTCGCTTAGTGCCTTTGAGGCTGACACTTCTGGTTGTTTCCCCGGAGACGCCACCACCGCACGATGGCCCAGACAGGAAACTCTTACACTTCTTGAGATCAGATCTCGTCTCGACTCTAAGTTCAGACACGCCAATCAAAAGGGCCCCTTATGGGATGAGCTTTCTAGAATCATGGCCGAAGAATATGGATATCAAAGGAGCGGCAAAAAATGCAGGGAAAAATTCGAAAACCTGTATAAATATTACAAGAAAACAAAAGAAGGCAAGGCAGGAAGACAAGATGGGAAGCATTACAGATTCTTCCGCCAACTTGAAGCCTTATATGGAGAAAACACCAACCCAATAATCTCAGCCCAAGAAACCAATTTCGGTAGCAACAACAGTGGCCTTCACTTTCACACACCCTCCCAGACAAACCAAGACATTTTTAATAGGCACTGTGATAGCGTTAGCCTCACTAATAATAACTCCACTGATGAGCTGGACACGTCATCATCGGATGAAAATGATTCGACGGAGAAGATGAGGAGAAAGAGAAGAGGAAGAAGAAGCTGGAAAGTAAAGATAAAAGAGCTGATAGACTCAGAGATGAAGAAGGTGATGGAGAAGCAAGAGGCATGGTTGGAGAGATTAATGAAGACACTGGAAGACAAGGAAAAGGAGAGGGCTTTGAGAGAGGAAGAATGGAGTAAACAAGAGGCAGCAAGGTTAGATAAGGAGCATAAGTTTTGGGCTAAAGAGAGGGCATGGATTGAAGCCAGAGATGCAGCTTTAATGGAGGCACTGCAGAAATTAACAGGAAGAGAAATAATAAAGGCTGGTGGTGATCCACCAAATGCTGATATTCAAAATTACAGTGAAAATCAGAATGAAGATGGAAGTGAAATACTACATAGCACTGACAGAGTTGGTGAAAGCTGGACAGAATGTGAGATCAGTAATATGGTTCAGATGAGAGCTGAGGTGGAATCCAGGTTTGGGCAAAGTGGGTGTCCGGAGGATGTTCTGTGGGAGGAAGTTGCTAACAAAATGGCTTGTTTTGGATACCACAAAGCTGCTTCCGTGTGCAAAGACAAGTGGGAAAGTATCAGAAGTAGCTATCATCATCACAAGAAGTGCAACAAGCAAAATTCATCAGCTACTTTTTACTTGGAAACCAATAATAATGATAATAATCAGTCACCACTATATAATCATCAAGGAAGTAGTGTTTATTGTGATGTCAACCAACAGCGGCAGGATGGTTCTTCACCTTCAAATTCTAACGTTGGCAATAATGCTGCTAGGGCTGATGGTTGTTTTCCCTTGTTCATGTGTGAAGGAGAAAATATGTGGGAAAATTTTGGGTTAAAGTTCAACAAAGGAAACCAAAACCCGTGA 1689 0.4541 MEMEDHHHHHRHQQQHQQHLDYATMGDLRHLMTAPRPLSADLFPHHPNFTAAGSHHYDALSFGRHQLMPDIVPPALHDSSPLNTSISVATPSASAAAAAAATPSLSAFEADTSGCFPGDATTARWPRQETLTLLEIRSRLDSKFRHANQKGPLWDELSRIMAEEYGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGENTNPIISAQETNFGSNNSGLHFHTPSQTNQDIFNRHCDSVSLTNNNSTDELDTSSSDENDSTEKMRRKRRGRRSWKVKIKELIDSEMKKVMEKQEAWLERLMKTLEDKEKERALREEEWSKQEAARLDKEHKFWAKERAWIEARDAALMEALQKLTGREIIKAGGDPPNADIQNYSENQNEDGSEILHSTDRVGESWTECEISNMVQMRAEVESRFGQSGCPEDVLWEEVANKMACFGYHKAASVCKDKWESIRSSYHHHKKCNKQNSSATFYLETNNNDNNQSPLYNHQGSSVYCDVNQQRQDGSSPSNSNVGNNAARADGCFPLFMCEGENMWENFGLKFNKGNQNP 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2518 562 Gene3D - 410 472 - -
Alju03g2518 562 Gene3D - 125 187 - -
Alju03g2518 562 CDD GT1 410 470 - -
Alju03g2518 562 PANTHER FI21293P1 92 513 - -
Alju03g2518 562 FunFam trihelix transcription factor PTL-like 125 187 - -
Alju03g2518 562 ProSiteProfiles Myb-like domain profile. 402 467 IPR001005 -
Alju03g2518 562 ProSiteProfiles Myb-like domain profile. 124 182 IPR001005 -
Alju03g2518 562 FunFam Trihelix transcription factor GT-2 410 472 - -
Alju03g2518 562 MobiDBLite consensus disorder prediction 257 284 - -
Alju03g2518 562 CDD GT1 124 189 - -
Alju03g2518 562 Pfam Myb/SANT-like DNA-binding domain 409 488 IPR044822 -
Alju03g2518 562 Pfam Myb/SANT-like DNA-binding domain 124 210 IPR044822 -
Alju03g2518 562 Coils Coil 301 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2518 Alju-ChrAlju03 51632281 51634811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2518 124 557 Trihelix Transcription Factor Family AT5G03680 49.895 8.17e-135 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Alju03g2518 Myb_DNA-bind_4 5.4e-19 CL0123