Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2504 ATGGGCTCATTCTCTGGCACTTGTGAAATAGTTGAAGCAGAGGAAGAGCTTAATTTAGGTAAATCTGCAAGGATTTATCAGACAAATTCTGAATTTAGCATGGGCGAGAAAAATCTGAAGCTTCCAGTGCTACCATTGGGATGCAAGGACAATCTGGAGAATGATATTAATAAGCTTTTTGAATCAGTTACCCTTAAGACTTCATTGAGGGATTCAGGCCTTTTACAAGATGGTACAAGCCCTAAGATGAAAAATACCTTAAAAAAGCCAATAACAGTGGGTGTTTCTCGGTCTCCTCGATTTGGTACTTCTGAGCCTGCAACTCTGAAGCAGGCATTGAGAGACCTATGTATATCTAAGGCATCAGAAATGGCTGCTATGAAGCGATTATCAAAATCAACAAATTCTCCCAGGGTATCTGAGGTTGGGAAGATCAAGGCTTTGTACAATTCAGTTGTAGGTGAAGGCACTCAACACGGGTCACCCTTTGTTGAGAATAAATGGAGTGGAATTGAAATATCAGTATCATCAGAAGAGAGCAAAACAATCTCATTGGACCAAACGTTCCAGTCTCATCAAGCTGCCAATCTCACTTCATCCGGTGCCGGTGTTCATTCTTCTTCAAGAGCTGTAAGTGCAACTAAAGAAAGCGATGCAGCAACTTCATCAATAGATATTGATTTGGTAAGTTCATCAAGTACAAGTGGGTTTCAATCTCAGCAATTAGTTTCTGATCAAACAGGAAAACAAACATCTGCAAATTCTTCATCTCTTTCTAATACTGATGGAAGCAAAGTAGAGTTGCCTGAATGTGATTCTGCGCCCAAAAAAATAGGAAATAAGGCATCTTCATCAAAGGTCGGGCGAAAAGTGAGGTTGCAAGCAGTTTCTTCCTCATCTACATCTACTTCAGTAAGTGGAAGTAGAGTAAGAGGAACCCACAATGGCCCTCGTACAGTCAAATCAGTCATAAGGAACAAGAAGAAACCGAAGCAAGATTCTGGTTCTTCTCTAAATGCTCCTACATCAAATGAAATGAATAGTAAATTAGTTCCCGGAAGAACTCCACTGGTTTGTGAGAGATGTCGGTGCACTTTAGAGTGTACAAGTAAAGAAAAGAGCCAAGATAGTTTAGCGCCAGACTGTGCCAATCCTGGAGATGCAGTAAGTTCAAGTAATGTAAATTACAGTGCAAACAAATCTGCTCCCTCATCAACTAACTGTAATAGAAGCAAAGCTGTAGCAAAAGTGAAAAAGAATGCCAGATTGAAAGAGCAACTTGAATTTTCACAAAGTTCAAAGAGTAGTCAAGAGTGCAGTAGTGGTACAAGTACCAGTGATGAAAGCAATGTGAGTGGGGCTAGTTGTGGCAACAGGCCTCACATGTCAAAGGATGTTAGGTGGGCAGCCATTCGTCAAGCTCATATGCAGCATAGAGTCTTGAGCTTGAGGCAGTTTAATCTTTTGAAGAAACTTGGTTGTGGAGACATTGGAACTGTATATCTTGCTGAACTAATTGGCACAAATTGCTTATTTGCTATCAAGGTCATGGACAATGAATTTTTGGCAAGAAGGAAGAAGATTTCTAGGGCTCAAACTGAAAGGGACATTTTAAGGATTCTTGATCATCCTTTTCTACCCACACTCTACGCTCAATTCACATCAGATAATTTGTCATGTCTGGTCATGGAATATTGTCCAGGCGGGGATCTTCATGTTCTACGGCAGAAGCAGCTTGGTAGAAGTTTTACTGAGCCGGCAGCTAGGTTTTATGTTGCCGAGGTCCTTCTTGCATTAGAGTACTTGCACATGCTTGGAATTGTTTACCGGGATTTGAAACCTGAAAACATTCTTGTTCGGGAAGATGGACACATAATGCTTACAGATTTTGACTTGTCACTGAGGTGTGATGTCAGCCCAACGCTTCTTAAATCATCTTTTGATGCAGATCCAGCAAGGATTTCTGGTCCTTGTGCACGATCTAGTTGCATTGAGCCATTTTGCATTGAGCCATCCTGTCAAGTTTCATGCTTCAGCCCTAGATTGTTGCCTGCTGCTGCAAAAACAAGGAAATTGAAAGCTGATCTTGCTGCGCAGATCAGATCATTGCCTCAACTTGTGGCTGAGCCTACTGATGCAAGATCAAATTCTTTTGTTGGCACCCATGAATACTTAGCACCTGAGATCATCAAAGGGGAGGGACATGGCGCTGCAGTTGATTGGTGGACCTTTGGCGTTTTTCTTTATGAACTTTTATATGGTAGAACACCCTTTAAAGGTTCTAATAATGAAGAAACATTAGCTAATGTGGTGTTACAAAGTCTCAGATTTCCTGACAGTCCATTTGTTAGTTTCCAAGCCAGGGATCTCATAAGAGGGTTGCTCGTTAAAGAACCGGAAAACCGTTTGGGTTCAGAGAAAGGAGCTGCTGAGATTAAACAGCATCCCTTTTTCGAGGGCCTTAATTGGGCATTAATTCGATGTGCTGTCCCCCCAGAGCTTCCGGAATTTTGTGATTTTGGAGTTCCAGACATGACCTCACAAGGCAAGTATTTTGAGTGTAAATCAACCGGAGAACATGTGGAATTTGAGTTGTTTTGA 2601 0.4148 MGSFSGTCEIVEAEEELNLGKSARIYQTNSEFSMGEKNLKLPVLPLGCKDNLENDINKLFESVTLKTSLRDSGLLQDGTSPKMKNTLKKPITVGVSRSPRFGTSEPATLKQALRDLCISKASEMAAMKRLSKSTNSPRVSEVGKIKALYNSVVGEGTQHGSPFVENKWSGIEISVSSEESKTISLDQTFQSHQAANLTSSGAGVHSSSRAVSATKESDAATSSIDIDLVSSSSTSGFQSQQLVSDQTGKQTSANSSSLSNTDGSKVELPECDSAPKKIGNKASSSKVGRKVRLQAVSSSSTSTSVSGSRVRGTHNGPRTVKSVIRNKKKPKQDSGSSLNAPTSNEMNSKLVPGRTPLVCERCRCTLECTSKEKSQDSLAPDCANPGDAVSSSNVNYSANKSAPSSTNCNRSKAVAKVKKNARLKEQLEFSQSSKSSQECSSGTSTSDESNVSGASCGNRPHMSKDVRWAAIRQAHMQHRVLSLRQFNLLKKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKISRAQTERDILRILDHPFLPTLYAQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRSFTEPAARFYVAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLTDFDLSLRCDVSPTLLKSSFDADPARISGPCARSSCIEPFCIEPSCQVSCFSPRLLPAAAKTRKLKADLAAQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQSLRFPDSPFVSFQARDLIRGLLVKEPENRLGSEKGAAEIKQHPFFEGLNWALIRCAVPPELPEFCDFGVPDMTSQGKYFECKSTGEHVEFELF 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2504 866 PANTHER FLIPPASE KINASE 1-RELATED 257 838 - -
Alju03g2504 866 Gene3D Transferase(Phosphotransferase) domain 1 566 634 - -
Alju03g2504 866 FunFam serine/threonine-protein kinase D6PK-like 570 637 - -
Alju03g2504 866 Gene3D Phosphorylase Kinase; domain 1 484 565 - -
Alju03g2504 866 CDD STKc_phototropin_like 484 836 - -
Alju03g2504 866 Pfam Protein kinase domain 487 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2504 866 Pfam Protein kinase domain 715 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2504 866 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Alju03g2504 866 MobiDBLite consensus disorder prediction 239 351 - -
Alju03g2504 866 ProSiteProfiles Protein kinase domain profile. 486 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2504 866 MobiDBLite consensus disorder prediction 239 266 - -
Alju03g2504 866 SUPERFAMILY Protein kinase-like (PK-like) 465 839 IPR011009 -
Alju03g2504 866 SMART serkin_6 486 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2504 866 MobiDBLite consensus disorder prediction 393 412 - -
Alju03g2504 866 MobiDBLite consensus disorder prediction 290 315 - -
Alju03g2504 866 MobiDBLite consensus disorder prediction 196 217 - -
Alju03g2504 866 MobiDBLite consensus disorder prediction 426 457 - -
Alju03g2504 866 MobiDBLite consensus disorder prediction 426 458 - -
Alju03g2504 866 MobiDBLite consensus disorder prediction 333 350 - -
Alju03g2504 866 FunFam Serine/threonine-protein kinase D6PK-like 484 569 - -
Alju03g2504 866 Gene3D Transferase(Phosphotransferase) domain 1 711 833 - -
Alju03g2504 866 FunFam serine/threonine-protein kinase D6PK-like 713 836 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2504 Alju-ChrAlju03 51524563 51527920 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2504 1 866 AGC Kinase Gene Family AT3G52890 52.490 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Alju03g2504 Pkinase 5.8e-36 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1607 01 12927880 12928662 Alju03g2504 03 51524563 51527920 CCT
Alju03g2504 03 51524563 51527920 Alju03g2504 03 51524563 51527920 ECH