Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2503 ATGGATGCCACGTGTCATGCCAGCTCACGACTCGACATCTTTATGAGGAAAGGCCCATGTATCTGTGCTTGCCACGTTTCGAAATTTGACCACGTAGGCGAATTCCCTCGTTACAGAAGTCGGCCCCCCTCCCCCGTCAACGGTTTAGCCTTGGAACGGCGCCGTTTGCACTCCCGTTGTCTTCCCCGGATCCGATCTCCACCGCGCCGGAAAATGAAGGTGATCGCGGCTTATTTGCTCGCTGTTTTGGGCGGGAACACCTGTCCGTCCTCTGATGATCTCAAGGGCATACTTGGATCTGTCGGAGCAGAGGTTGACGATGAAAGGATTGAACTTCTTTTGTCTGAAGTCAAGGGTAAAGACCTAACGGAGCTGATCGCCAGCGGTAGGGAAAAGTTGGCCTCTGTGCCTTCTGGCGGTGGTGCTGCAGTTGCGATGGCTGCCGCACCTGGTGGAGCTGCGGCTCCAGCTGCAGCCGAGCCAAAGAAAGAGGAAAAGGTGGAGGAGAAAGAAGAATCGGATGATGACATGGGCTTCAGTCTCTTTGACTAA 552 0.5453 MDATCHASSRLDIFMRKGPCICACHVSKFDHVGEFPRYRSRPPSPVNGLALERRRLHSRCLPRIRSPPRRKMKVIAAYLLAVLGGNTCPSSDDLKGILGSVGAEVDDERIELLLSEVKGKDLTELIASGREKLASVPSGGGAAVAMAAAPGGAAAPAAAEPKKEEKVEEKEESDDDMGFSLFD 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2503 183 Hamap 50S ribosomal protein L12 [rpl12]. 73 183 IPR027534 GO:0003735|GO:0005840|GO:0006414
Alju03g2503 183 Pfam 60s Acidic ribosomal protein 89 182 - -
Alju03g2503 183 FunFam 60S acidic ribosomal protein P2 69 130 - -
Alju03g2503 183 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 72 183 IPR044076 GO:0002182|GO:0003735|GO:0022625
Alju03g2503 183 MobiDBLite consensus disorder prediction 150 183 - -
Alju03g2503 183 Gene3D - 71 129 IPR038716 -
Alju03g2503 183 CDD Ribosomal_P2 72 183 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2503 Alju-ChrAlju03 51516475 51518395 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2503 72 183 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 69.643 2.37e-34 115