Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2497 ATGATTCCCCCGCCTTATACATCCTTCCCCCTCTGGTTCCCATTTCCCATCCTTATCTTCTCTTTCTCCTCACTCAGGTACTATTCCTCCTCCTTTTTTCTCCCTTCCTCATACTTGAACGTTTTTTCTTTTCTTTTTCTCTATTCTTCATCTTCTTCCCCCACAAAACCTTCCTACGCACAATACAGATCCTTTGCATCTTTATGTCTTCTTTCTTTCCTCTTTCTTCTTGTCTCTGGCTTAAGCCCTATATCCCTTCTTGACGAGATCAAGCCTACAAATATCAATATTCACGTTTCCTTTATTTCCCTTCAATCTCTGCACGTTAAGGTTTCTTTCATCGTTAATTCCATAATCCCCTTCCCAAATTCAGAGACACCGCAGGTCTGTGAGGGCAGATCCAGAACGAAGAACGATATGGCGGAAGAGCACCGATGCCAGGCTCCCGAAGGTCACCGACTCTGTGCTAATAACTGCGGCTTCTTGGGCACCCCGGCCACCATGAATCTCTGCTCCAAGTGCTACAGGGATTTCCGTTTGAAGGAGCAACAGGAAGCCTCCACCAAATCCACAATCGAAACGGCCCTCTCCTCCCCTACTGCGCCGTCCTCAGGGTCACCTGTTTTTCCGGCCGTGGAGTCCCCCGTTCCTCCGCCGACGCTAACATTGCCCGAAGTTGCAGTAGATGCGTCGATTTCGGCTGTTGCGTCCTCCGTACCGGAAGCGGCGACCGCGCAACCCAACCGATGCGGTTCGTGCCGGAAACGGGTCGGGCTGACCGGGTTCAAGTGCAAGTGTGGGGCCACGTTTTGTGGGACCCACAGGTATCCCGAGAAACACGGGTGTAGCTTCGATTTCAAGAAGGTGGGCCGAGAGGAAATAGCTCGGGCAAACCCTCTGATCAAGGCTAAGAAGCTGGAAATGATTTAA 930 0.5086 MIPPPYTSFPLWFPFPILIFSFSSLRYYSSSFFLPSSYLNVFSFLFLYSSSSSPTKPSYAQYRSFASLCLLSFLFLLVSGLSPISLLDEIKPTNINIHVSFISLQSLHVKVSFIVNSIIPFPNSETPQVCEGRSRTKNDMAEEHRCQAPEGHRLCANNCGFLGTPATMNLCSKCYRDFRLKEQQEASTKSTIETALSSPTAPSSGSPVFPAVESPVPPPTLTLPEVAVDASISAVASSVPEAATAQPNRCGSCRKRVGLTGFKCKCGATFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAKKLEMI 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2497 309 Gene3D - 138 201 - -
Alju03g2497 309 Pfam A20-like zinc finger 153 176 IPR002653 GO:0003677|GO:0008270
Alju03g2497 309 ProSiteProfiles Zinc finger A20-type profile. 149 183 IPR002653 GO:0003677|GO:0008270
Alju03g2497 309 MobiDBLite consensus disorder prediction 189 207 - -
Alju03g2497 309 MobiDBLite consensus disorder prediction 189 212 - -
Alju03g2497 309 FunFam Zinc finger AN1-type containing 6 226 305 - -
Alju03g2497 309 Gene3D - 228 305 IPR035896 -
Alju03g2497 309 SMART AN1_Zf_4 250 287 IPR000058 GO:0008270
Alju03g2497 309 SMART A20_3 152 176 IPR002653 GO:0003677|GO:0008270
Alju03g2497 309 PANTHER AN1-TYPE ZINC FINGER PROTEIN 152 308 - -
Alju03g2497 309 Pfam AN1-like Zinc finger 250 286 IPR000058 GO:0008270
Alju03g2497 309 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 154 196 - -
Alju03g2497 309 SUPERFAMILY AN1-like Zinc finger 241 304 IPR035896 -
Alju03g2497 309 ProSiteProfiles Zinc finger AN1-type profile. 244 290 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2497 Alju-ChrAlju03 51483333 51484262 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2497 140 309 C2H2 Transcription Factor Family AT3G52800 55.747 2.56e-52 168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1372 01 10769307 10769807 Alju03g2497 03 51483333 51484262 CCT