Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2486 ATGGGGGTGGGGGAAGGTGAGACGACGAACTCGCAGGGCGAGGTGGAATCAGGGCACAAGAACAATCACCAATTCTCATCGCTCGGAAGACAATCGTCGATTTATTCGCTCACGCTCGACGAGTTTCAGCACACGCTATGCGAAAGTGGCAAGAATTTTGGGTCCATGAACATGGACGAGTTTCTCAGCAGTATCTGGAACGCCGAGGAGAGCCAGGCTATTAACTCTAACCATAATTTTAACGCCAACAACAACAACACAGGCGTACCTCTGAATGAAGCAGTCGCTGACAAAGGAATGACTCGGAAGCAGCCAAGCCTTCCTCGTCAGGGCTCTCTGACGTTGCCGGCGCCGCTCTGTAGGAAGACGGTGGATGAAGTTTGGTCTGAGATACACAGAGGACAGCAGGGTCATCTGAGCAATAGCGGTGGCGCCAATGGCAATGTGCAGAATACCGAATCTGCCCCTCGCCAGCCTACTTTTGGGGAAATGACTCTTGAGGATTTCTTGATCAAAGCAGGGGTGGTTCGGGAATCCTGTACAGCTCCGATGCCCGCCCAAGCTTCGACGCCGCAGCAGCAGCCGCCGCCACCGTACGGGATGTACCCGAATAACAACTCGACAATGGGGCCCTCTTTTGTTGGTAGGCCCGTAATGGCGGGCAATGTGGTTCTCCCGTACCAGGCGGTGGCTCAGGGAGAGCCTTCTTCCGGGTACGCCGGGAATGGGAAGAGGGATAATGGGTATCCTCCGCCGCCGCCGCCGCTGTCGGGGGCTTGCTACGGAGGGAGGGTGCTTAATGGAAGCGGTGGGTGTGGGGCGCCGGCGCCGACTATGGGAATAGGGGCGCCGTTGAGCCCGGTTTCGCCAGATGGGCTGGGAACAAATGAGAACTGTGGTGGTCAGTTTGGGTTAGAGATGGGGATGTTGAGAGGAAGGAAGAGGATCATCGATGGTCCGGTGGAGAAGGTGGTGGAGAGAAGGCAGAGGAGGATGATCAAGAACAGAGAATCAGCGGCGAGATCCAGAGCCAGAAAACAGGCATACACGGTTGAATTAGAAGCAGAACTGAACCAATTAAGAGAAGAAAACGCCCATCTGAAACTTGCGCTGGCCGAGCTTGAGAGGAGACGAAAGCAACAGAGTCTTGAGGAAGCGAACATGAGAGTTCCTACCAAGGCTCAGAAGGCAAGAGAGAAATTGAGGACCTTGACAAGGACTCACCTTCCTGTTGAAGTGATTGGAAATATATTATCTCATCTTGGGTCCGCTCAAGATGTTGTAATTGCTTCAACCTGCAAAAAATGGAGAGAAGCTTGGCGCAATCACCTCCACACTCTTTCATTCAATTCTTCTGATTGGCTCATCTATCATGAATTAACTCCTAGTAGATGGATTGATGTTGATGAGTTTTCCGCTGCCCCAGTCATTGCCTGGCTTATGTATACCAAGGATTCCTTACGACAATTACGTTATAATGTAAGGACAACCCCAAATTTCAATATCATAGAAAAATGTGGCAGGCAAAAGCTGGAAACATTGGTATTAGCTCACAACTCCATTACAGGTGTTGAGCCCACTTATCAGAAATTTCCTTGCCTGAAATCACTCTCACTTAGTTTTGTTAGCATTTCAGCGTTGGATCTGAGCCTTCTACTTAGCGTTTGTCCAAGGCTTGAAACCTTGTCCATGGTTAGTCCAGAAATTGCCATGTCAGATGCACAGACTTCCATGGAGCTTAACAGCTCGTCTTTGAGGCATTTTTATGTTGAGTCATTCGGGTTGGATAAGTTCATGTGGGAGGCAGATTTGCTTGAGAATTTGCATTTGAAAGATTGTACCTTTGAGGTTTTTGAATTGGTCAGCAAGGGAAACTTGAAAGTGCTGAGGATTGATGATGTGAGTGTTATCCATCTGGATATTGGCGAGACTGCAGAGAATCTTGAGATTGTAGATGTCAGTAACTTTACAATCATGTGGCCAAAATTTTATCATATGATCTCAAAAGCATCAAAGCTACTAAAACTTCGGTTTTGGGGTGTTGTATTTGATGATGAGGATGAAGTTGTGGATATAGAGTCAATTTCTGTTTGTTTTCCTCAGTTGACACACTTATCCTTAAGTCATGATTTAAGAGATGGAGTACTTCATTATGGCTTGCAGGGTTTGTCTCTTTTAGTGAATGTAGTTGTGTTGGAGCTTGGATGGACAACAATTAATGACCTCTTCTCGGTTTTGGTGGCTGGGCTTTTGGAAAGATGTCTCCATTTGAAGAAGTTGATCATTTATGGGGTTCTTTCAGAGGTCAAAACTCATAAAGAGTGTCAAACCTTTGCCAAATTTACTGAATCTATTCTGCAACTTGGACGAAAATATATGCAAGTAATGGTTGAGTTTGAATATGAATAG 2409 0.472 MGVGEGETTNSQGEVESGHKNNHQFSSLGRQSSIYSLTLDEFQHTLCESGKNFGSMNMDEFLSSIWNAEESQAINSNHNFNANNNNTGVPLNEAVADKGMTRKQPSLPRQGSLTLPAPLCRKTVDEVWSEIHRGQQGHLSNSGGANGNVQNTESAPRQPTFGEMTLEDFLIKAGVVRESCTAPMPAQASTPQQQPPPPYGMYPNNNSTMGPSFVGRPVMAGNVVLPYQAVAQGEPSSGYAGNGKRDNGYPPPPPPLSGACYGGRVLNGSGGCGAPAPTMGIGAPLSPVSPDGLGTNENCGGQFGLEMGMLRGRKRIIDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLREENAHLKLALAELERRRKQQSLEEANMRVPTKAQKAREKLRTLTRTHLPVEVIGNILSHLGSAQDVVIASTCKKWREAWRNHLHTLSFNSSDWLIYHELTPSRWIDVDEFSAAPVIAWLMYTKDSLRQLRYNVRTTPNFNIIEKCGRQKLETLVLAHNSITGVEPTYQKFPCLKSLSLSFVSISALDLSLLLSVCPRLETLSMVSPEIAMSDAQTSMELNSSSLRHFYVESFGLDKFMWEADLLENLHLKDCTFEVFELVSKGNLKVLRIDDVSVIHLDIGETAENLEIVDVSNFTIMWPKFYHMISKASKLLKLRFWGVVFDDEDEVVDIESISVCFPQLTHLSLSHDLRDGVLHYGLQGLSLLVNVVVLELGWTTINDLFSVLVAGLLERCLHLKKLIIYGVLSEVKTHKECQTFAKFTESILQLGRKYMQVMVEFEYE 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2486 802 MobiDBLite consensus disorder prediction 236 256 - -
Alju03g2486 802 FunFam protein ABSCISIC ACID-INSENSITIVE 5 isoform X1 325 381 - -
Alju03g2486 802 SUPERFAMILY Leucine zipper domain 327 377 IPR046347 GO:0003700|GO:0006355
Alju03g2486 802 SUPERFAMILY F-box domain 397 451 IPR036047 GO:0005515
Alju03g2486 802 Pfam F-box domain 408 442 IPR001810 GO:0005515
Alju03g2486 802 Pfam bZIP transcription factor 327 379 IPR004827 GO:0003700|GO:0006355
Alju03g2486 802 Gene3D - 325 382 - -
Alju03g2486 802 SMART fbox_2 409 449 IPR001810 GO:0005515
Alju03g2486 802 MobiDBLite consensus disorder prediction 1 26 - -
Alju03g2486 802 Coils Coil 343 389 - -
Alju03g2486 802 Gene3D Ribonuclease Inhibitor 572 785 IPR032675 -
Alju03g2486 802 MobiDBLite consensus disorder prediction 135 158 - -
Alju03g2486 802 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 330 345 IPR004827 GO:0003700|GO:0006355
Alju03g2486 802 CDD bZIP_plant_BZIP46 327 381 - -
Alju03g2486 802 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 325 377 IPR004827 GO:0003700|GO:0006355
Alju03g2486 802 Gene3D Ribonuclease Inhibitor 483 571 IPR032675 -
Alju03g2486 802 SUPERFAMILY RNI-like 508 765 - -
Alju03g2486 802 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 29 391 IPR043452 GO:0003700|GO:0045893
Alju03g2486 802 SMART brlzneu 323 389 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2486 Alju-ChrAlju03 51396090 51402165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2486 22 381 bZIP Transcription Factor Family AT2G36270 54.237 1.58e-107 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Alju03g2486 bZIP_1 1.6e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1359 01 10667619 10669060 Alju03g2486 03 51396090 51402165 CCT